Evidence map›Paper›PMID 38072042›Full record

ArticleThe Journal of biological chemistry2024

Structural characterization and functional insights into the type II secretion system of the poly-extremophile Deinococcus radiodurans.

Domenica Farci, Stefan Milenkovic, Luca Iesu, Marta Tanas, Matteo Ceccarelli, Dario Piano

Open access · goldAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
1.3field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 4 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Domenica FarciDepartment of Plant Physiology, Warsaw University of Life Sciences - SGGW, Warsaw, Poland; Department of Life and Environmental Sciences, Università degli Studi di Cagliari, Cagliari, Italy; R&D Department, ReGenFix Laboratories, Sardara, Italy. Electronic address: domenica.farci@unica.it.
Stefan MilenkovicDepartment of Physics and IOM/CNR, Università degli Studi di Cagliari, Monserrato, Italy.
Luca IesuDepartment of Life and Environmental Sciences, Università degli Studi di Cagliari, Cagliari, Italy.
Marta TanasDepartment of Life and Environmental Sciences, Università degli Studi di Cagliari, Cagliari, Italy.
Matteo CeccarelliDepartment of Physics and IOM/CNR, Università degli Studi di Cagliari, Monserrato, Italy.
Dario PianoDepartment of Plant Physiology, Warsaw University of Life Sciences - SGGW, Warsaw, Poland; Department of Life and Environmental Sciences, Università degli Studi di Cagliari, Cagliari, Italy; R&D Department, ReGenFix Laboratories, Sardara, Italy. Electronic address: dario.piano@unica.it.
University of Cagliari · ITWarsaw University of Life Sciences · PL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The extremophile bacterium D. radiodurans boasts a distinctive cell envelope characterized by the regular arrangement of three protein complexes. Among these, the Type II Secretion System (T2SS) stands out as a pivotal structural component. We used cryo-electron microscopy to reveal unique features, such as an unconventional protein belt (DR_1364) around the main secretin (GspD), and a cap (DR_0940) found to be a separated subunit rather than integrated with GspD. Furthermore, a novel region at the N-terminus of the GspD constitutes an additional second gate, supplementing the one typically found in the outer membrane region. This T2SS was found to contribute to envelope integrity, while also playing a role in nucleic acid and nutrient trafficking. Studies on intact cell envelopes show a consistent T2SS structure repetition, highlighting its significance within the cellular framework.

Indexed as

Cell MembraneDeinococcusExtremophilesType II Secretion SystemsBacterial ProteinsCryoelectron MicroscopyProtein TransportBacterial ProteinsType II Secretion Systemscell envelopecryo-electron microscopyDeinococcus radioduranslipoproteinsT2SS

Identifiers

PMID38072042
PMCPMC10828601
OpenAlexW4389513609

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.