Evidence map›Paper›PMID 38069099›Full record

ArticleInternational journal of molecular sciences2023

Deprivation of Sexual Reproduction during Garlic Domestication and Crop Evolution.

Einat Shemesh-Mayer, Adi Faigenboim, Amir Sherman, Song Gao, Zheng Zeng, Touming Liu, Rina Kamenetsky-Goldstein

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
2.4field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Einat Shemesh-MayerInstitute of Plant Sciences, Agricultural Research Organization, The Volcani Institute, Rishon LeZion 7505101, Israel.
Adi FaigenboimInstitute of Plant Sciences, Agricultural Research Organization, The Volcani Institute, Rishon LeZion 7505101, Israel.
Amir ShermanInstitute of Plant Sciences, Agricultural Research Organization, The Volcani Institute, Rishon LeZion 7505101, Israel.
Song GaoCollege of Horticulture and Landscape Architecture, Yangzhou University, Hanjiang District, Yangzhou 225012, China.
Zheng ZengCollege of Horticulture and Landscape Architecture, Yangzhou University, Hanjiang District, Yangzhou 225012, China.
Touming LiuCollege of Horticulture and Landscape Architecture, Yangzhou University, Hanjiang District, Yangzhou 225012, China.
Rina Kamenetsky-GoldsteinInstitute of Plant Sciences, Agricultural Research Organization, The Volcani Institute, Rishon LeZion 7505101, Israel.ORCID 0000-0002-8330-5592
Agricultural Research Organization · ILYangzhou University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Garlic, originating in the mountains of Central Asia, has undergone domestication and subsequent widespread introduction to diverse regions. Human selection for adaptation to various climates has resulted in the development of numerous garlic varieties, each characterized by specific morphological and physiological traits. However, this process has led to a loss of fertility and seed production in garlic crops. In this study, we conducted morpho-physiological and transcriptome analyses, along with whole-genome resequencing of 41 garlic accessions from different regions, in order to assess the variations in reproductive traits among garlic populations. Our findings indicate that the evolution of garlic crops was associated with mutations in genes related to vernalization and the circadian clock. The decline in sexual reproduction is not solely attributed to a few mutations in specific genes, but is correlated with extensive alterations in the genetic regulation of the annual cycle, stress adaptations, and environmental requirements. The regulation of flowering ability, stress response, and metabolism occurs at both the genetic and transcriptional levels. We conclude that the migration and evolution of garlic crops involve substantial and diverse changes across the entire genome landscape. The construction of a garlic pan-genome, encompassing genetic diversity from various garlic populations, will provide further insights for research into and the improvement of garlic crops.

Indexed as

GarlicCrops, AgriculturalDomesticationGene Expression ProfilingHumansPhenotypeReproductionAllium sativumfloweringgene expressiongenometranscriptome

Identifiers

PMID38069099
PMCPMC10706073
OpenAlexW4389051445

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.