Evidence map›Paper›PMID 38068905›Full record

ArticleInternational journal of molecular sciences2023

Shedding Light on Colorectal Cancer: An In Vivo Raman Spectroscopy Approach Combined with Deep Learning Analysis.

Maria Anthi Kouri, Maria Karnachoriti, Ellas Spyratou, Spyros Orfanoudakis, Dimitris Kalatzis, Athanassios G Kontos, Ioannis Seimenis, Efstathios P Efstathopoulos, Alexandra Tsaroucha, Maria Lambropoulou

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
2.1field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 6 citations in OpenAlex.

  1. Special Issue "Raman Spectroscopy and Machine Learning in Human Disease".International journal of molecular sciences · 2025
    Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Maria Anthi Kouri2nd Department of Radiology, Medical School, National and Kapodistrian University of Athens, 11527 Athens, Greece.ORCID 0000-0002-3296-3317
Maria KarnachoritiPhysics Department, School of Applied Mathematical and Physical Sciences, National Technical University of Athens, Iroon Politechniou 9, 15780 Athens, Greece.ORCID 0000-0001-6227-3272
Ellas Spyratou2nd Department of Radiology, Medical School, National and Kapodistrian University of Athens, 11527 Athens, Greece.ORCID 0000-0002-7270-4387
Spyros OrfanoudakisPhysics Department, School of Applied Mathematical and Physical Sciences, National Technical University of Athens, Iroon Politechniou 9, 15780 Athens, Greece.ORCID 0009-0000-9763-5560
Dimitris Kalatzis2nd Department of Radiology, Medical School, National and Kapodistrian University of Athens, 11527 Athens, Greece.ORCID 0000-0002-2186-4567
Athanassios G KontosPhysics Department, School of Applied Mathematical and Physical Sciences, National Technical University of Athens, Iroon Politechniou 9, 15780 Athens, Greece.ORCID 0000-0001-9193-0198
Ioannis SeimenisMedical School, National and Kapodistrian University of Athens, 75 Mikras Assias Str., 11527 Athens, Greece.ORCID 0000-0003-3665-5271
Efstathios P Efstathopoulos2nd Department of Radiology, Medical School, National and Kapodistrian University of Athens, 11527 Athens, Greece.ORCID 0000-0003-2747-3353
Alexandra TsarouchaLaboratory of Bioethics, School of Medicine, Democritus University of Thrace, 68100 Alexandroupolis, Greece.
Maria LambropoulouLaboratory of Histology-Embryology, School of Medicine, Democritus University of Thrace, 68100 Alexandroupolis, Greece.ORCID 0000-0001-8651-3680
National and Kapodistrian University of Athens · GRNational Technical University of Athens · GRDemocritus University of Thrace · GRUniversity of Massachusetts Lowell · US

Funding

Greek Ministry of Education Religious Affairs and Sports. MIS 5164455
6 · The paper itself

Abstract

Raman spectroscopy has emerged as a powerful tool in medical, biochemical, and biological research with high specificity, sensitivity, and spatial and temporal resolution. Recent advanced Raman systems, such as portable Raman systems and fiber-optic probes, provide the potential for accurate in vivo discrimination between healthy and cancerous tissues. In our study, a portable Raman probe spectrometer was tested in immunosuppressed mice for the in vivo localization of colorectal cancer malignancies from normal tissue margins. The acquired Raman spectra were preprocessed, and principal component analysis (PCA) was performed to facilitate discrimination between malignant and normal tissues and to highlight their biochemical differences using loading plots. A transfer learning model based on a one-dimensional convolutional neural network (1D-CNN) was employed for the Raman spectra data to assess the classification accuracy of Raman spectra in live animals. The 1D-CNN model yielded an 89.9% accuracy and 91.4% precision in tissue classification. Our results contribute to the field of Raman spectroscopy in cancer diagnosis, highlighting its promising role within clinical applications.

Indexed as

Colorectal NeoplasmsDeep LearningAnimalsMiceNeural Networks, ComputerSpectrum Analysis, Ramancolorectal cancerportable Raman probeRaman spectroscopySCID mice modeltissue classificationtransfer learning analysis

Identifiers

PMID38068905
PMCPMC10706261
OpenAlexW4388859161

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.