Evidence map›Paper›PMID 38067199›Full record

ArticleCancers2023

Constructing a T-Cell Receptor-Related Gene Signature for Prognostic Stratification and Therapeutic Guidance in Head and Neck Squamous Cell Carcinoma.

Ye Lu, Zizhao Mai, Jiarong Zheng, Pei Lin, Yunfan Lin, Li Cui, Xinyuan Zhao

Open access · goldAbstract read
In one paragraph

Article in Cancers, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.7field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Ye LuStomatological Hospital, School of Stomatology, Southern Medical University, Guangzhou 510280, China.
Zizhao MaiStomatological Hospital, School of Stomatology, Southern Medical University, Guangzhou 510280, China.
Jiarong ZhengDepartment of Dentistry, The First Affiliated Hospital, Sun Yat-Sen University, Guangzhou 510080, China.
Pei LinStomatological Hospital, School of Stomatology, Southern Medical University, Guangzhou 510280, China.
Yunfan LinStomatological Hospital, School of Stomatology, Southern Medical University, Guangzhou 510280, China.
Li CuiStomatological Hospital, School of Stomatology, Southern Medical University, Guangzhou 510280, China.
Xinyuan ZhaoStomatological Hospital, School of Stomatology, Southern Medical University, Guangzhou 510280, China.
Southern Medical University · CNSun Yat-sen University · CN

Funding

Guangdong Provincial Science and Technology Project Foundation 2022A0505050038National Natural Science Foundation of China 81901006Science Research Cultivation Program of Stomatological Hospital, Southern Medical University PY2020002Scientific Research Talent Cultivation Project of Stomatological Hospital, Southern Medical University RC202005
6 · The paper itself

Abstract

backgroudThe stratification of head and neck squamous cell carcinoma (HNSCC) patients based on prognostic differences is critical for therapeutic guidance. This study was designed to construct a predictive signature derived from T-cell receptor-related genes (TCRRGs) to forecast the clinical outcomes in HNSCC.

methodsWe sourced gene expression profiles from The Cancer Genome Atlas (TCGA) HNSCC dataset, GSE41613, and GSE65858 datasets. Utilizing consensus clustering analysis, we identified two distinct HNSCC clusters according to TCRRG expression. A TCRRG-based signature was subsequently developed and validated across diverse independent HNSCC cohorts. Moreover, we established a nomogram model based on TCRRGs. We further explored differences in immune landscapes between high- and low-risk groups.

resultsThe TCGA HNSCC dataset was stratified into two clusters, displaying marked variations in both overall survival (OS) and immune cell infiltration. Furthermore, we developed a robust prognostic signature based on TCRRG utilizing the TCGA HNSCC train cohort, and its prognostic efficacy was validated in the TCGA HNSCC test cohort, GSE41613, and GSE65858. Importantly, the high-risk group was characterized by a suppressive immune microenvironment, in contrast to the low-risk group. Our study successfully developed a robust TCRRG-based signature that accurately predicts clinical outcomes in HNSCC, offering valuable strategies for improved treatments.

Indexed as

head and neck squamous cell carcinomaimmune infiltrationprognosis predictionrisk signatureT-cell receptor-related genes

Identifiers

PMID38067199
PMCPMC10705130
OpenAlexW4388848671

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.