Evidence map›Paper›PMID 38067078›Full record

ArticleAnimals : an open access journal from MDPI2023

Genomic Dissection through Whole-Genome Resequencing of Five Local Pig Breeds from Shanghai, China.

Jun Gao, Lingwei Sun, Hongmei Pan, Shushan Zhang, Jiehuan Xu, Mengqian He, Keqing Zhang, Jinyong Zhou, Defu Zhang, Caifeng Wu and 1 more

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Animals : an open access journal from MDPI, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
2.2field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Jun GaoInstitute of Animal Husbandry and Veterinary Science, Shanghai Academy of Agricultural Sciences, Shanghai 201106, China.ORCID 0000-0002-2372-4445
Lingwei SunInstitute of Animal Husbandry and Veterinary Science, Shanghai Academy of Agricultural Sciences, Shanghai 201106, China.ORCID 0000-0002-3438-6584
Hongmei PanChongqing Academy of Animal Sciences, Chongqing 402460, China.
Shushan ZhangInstitute of Animal Husbandry and Veterinary Science, Shanghai Academy of Agricultural Sciences, Shanghai 201106, China.
Jiehuan XuInstitute of Animal Husbandry and Veterinary Science, Shanghai Academy of Agricultural Sciences, Shanghai 201106, China.
Mengqian HeInstitute of Animal Husbandry and Veterinary Science, Shanghai Academy of Agricultural Sciences, Shanghai 201106, China.
Keqing ZhangShanghai Municipal Key Laboratory of Agri-Genetics and Breeding, Shanghai 201106, China.
Jinyong ZhouShanghai Municipal Key Laboratory of Agri-Genetics and Breeding, Shanghai 201106, China.
Defu ZhangInstitute of Animal Husbandry and Veterinary Science, Shanghai Academy of Agricultural Sciences, Shanghai 201106, China.
Caifeng WuInstitute of Animal Husbandry and Veterinary Science, Shanghai Academy of Agricultural Sciences, Shanghai 201106, China.
Jianjun DaiInstitute of Animal Husbandry and Veterinary Science, Shanghai Academy of Agricultural Sciences, Shanghai 201106, China.
Shanghai Academy of Agricultural Sciences · CNMinistry of Agriculture and Rural Affairs · CNChongqing Academy of Animal Science · CN

Funding

Chongqing Technology Innovation and Application Development Project CSTC2021-JSCX-DXWTBX0004National Key Research and Development Plan of China 2021YFD1200303National Key Research and Development Plan of China 2021YFD1200305Project of Developing Agriculture by Science and Technology in Shanghai 2022, No.1-1
6 · The paper itself

Abstract

China has rich genetic resources of local pig breeds. In this study, whole-genome resequencing was performed on five Shanghai local pig breeds, aiming to analyze their population genetic structure and unique genomic characteristics. Tens of millions of single nucleotide variants were obtained through the resequencing of a total of 150 individual pigs from five local pig breeds (Meishan, Fengjing, Shawutou, Pudong White, and Shanghai White) after mapping them with the pig reference genome of

Indexed as

commercial pig breedgenomic characteristicsindigenous Shanghai pig breedselective sweep analysiswhole-genome resequencing

Identifiers

PMID38067078
PMCPMC10705062
OpenAlexW4389222916

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.