Evidence map›Paper›PMID 38066559›Full record

ArticleBMC medical genomics2023

Vitamin D receptor rs3782905 and vitamin D binding protein rs7041 polymorphisms are associated with hepatocellular carcinoma susceptibility in cirrhotic HCV patients.

Asmaa Samir El-Masry, Amina M Medhat, Mahmoud El-Bendary, Rania Hassan Mohamed

Open access · goldAbstract read
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Article in BMC medical genomics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.3field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

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3 · Its place in the literature

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2 citing papers in PubMed, 1 citations in OpenAlex.

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4 · The record

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5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Asmaa Samir El-MasryDepartment of Biochemistry, Faculty of Science, Ain Shams University, Cairo, Egypt.
Amina M MedhatDepartment of Biochemistry, Faculty of Science, Ain Shams University, Cairo, Egypt.
Mahmoud El-BendaryDepartment of Tropical Medicine and Hepatology, Faculty of Medicine, Mansoura University, Dakahlia, Egypt.
Rania Hassan MohamedDepartment of Biochemistry, Faculty of Science, Ain Shams University, Cairo, Egypt. rania.hassan@sci.asu.edu.eg.ORCID 0000-0001-7391-9550
Ain Shams University · EGMansoura University · EG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe severity of chronic hepatitis C and susceptibility to hepatocellular carcinoma (HCC) are associated with genetic variations within vitamin D receptor (VDR) in several populations. This study aims to determine the significance of the VDRs (rs2228570, rs3782905, rs11568820) and DBP (rs7041) for the susceptibility to HCC in Egyptian patients with chronic HCV infection and their effect on the progression of liver cirrhosis to carcinogenesis.

methodsSingle nucleotide polymorphisms (SNPs) VDR (rs2228570, rs3782905), and DBP rs7041 were genotyped using restriction fragment length-PCR (RFLP-PCR) technique and VDR rs11568820 was genotyped using single strand polymorphism PCR (SSP PCR). These SNPs genotypes, haplotypes and linkage disequilibrium analyses were examined in 299 Egyptian individuals (100 HCV-cirrhotic patients, 99 HCC- HCV patients, and 100 healthy controls).

resultThe VDR rs2228570 CC genotype, VDR rs3782905 GC and CC genotypes, and DBP rs7041 GG genotype are significantly higher in HCC. It is noteworthy that, VDR rs3782905 CC and DBP rs7041 TG genotypes are higher in HCV induced liver cirrhosis than with HCC progression in HCV infected patients. Furthermore, among patients, the relationship between these SNPs and smoking status, gender, and HCC susceptibility was reported.

conclusionAmong the four investigated SNPs, there are associations between VDR rs3782905 and DBP rs7041 and the HCC progression in Egyptian patients chronically infected with HCV. These SNPs are considered as risk factors in HCV induced liver cirrhosis and HCC. The combinations of these SNPs with smoking status and gender are statistically linked to a high risk of HCC. Future research with a larger sample size of subjects with HCV infection is advised, because chronic liver disease induced by HCV infection is the primary cause of HCC in Egypt. We recommend screening of these SNPs for prediction of LC and HCC development in HCV infected patients, which may improve the used therapeutic protocol. These results suggest that VDR polymorphisms may be potential determinants for HCC susceptibility in Egyptian HCV patients.

Indexed as

Carcinoma, HepatocellularHepatitis CLiver NeoplasmsReceptors, CalcitriolVitamin D-Binding ProteinCase-Control StudiesGenetic Predisposition to DiseaseGenotypeHumansLiver CirrhosisPolymorphism, Single NucleotideVitamin DReceptors, CalcitriolVitamin DVitamin D-Binding ProteinHCCHCVSingle nucleotide PolymorphismVitamin D Binding ProteinVitamin D Receptor

Identifiers

PMID38066559
PMCPMC10704848
OpenAlexW4389482779

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.