Evidence map›Paper›PMID 38064552›Full record

ArticleScience advances2023

Tracking DNA-based antigen-specific T cell receptors during progression to type 1 diabetes.

Angela M Mitchell, Erin E Baschal, Kristen A McDaniel, Theodore Fleury, Hyelin Choi, Laura Pyle, Liping Yu, Marian J Rewers, Maki Nakayama, Aaron W Michels

Open access · goldAbstract read
In one paragraph

Article in Science advances, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
5.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Observational
  6. Article
  7. Aberrant immune regulation and enrichment of stem-like CD8bioRxiv : the preprint server for biology · 2026
    Article
  8. Article
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  10. Review
  11. Article
  12. Review
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  14. Article
  15. Article
  16. Article
  17. Article
  18. Integrating Omics into Functional Biomarkers of Type 1 Diabetes.Cold Spring Harbor perspectives in medicine · 2024
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Angela M MitchellBarbara Davis Center for Diabetes, University of Colorado School of Medicine, Aurora, CO, USA.ORCID 0000-0003-1955-5850
Erin E BaschalBarbara Davis Center for Diabetes, University of Colorado School of Medicine, Aurora, CO, USA.ORCID 0000-0002-8936-434X
Kristen A McDanielBarbara Davis Center for Diabetes, University of Colorado School of Medicine, Aurora, CO, USA.ORCID 0000-0003-4777-5295
Theodore FleuryBarbara Davis Center for Diabetes, University of Colorado School of Medicine, Aurora, CO, USA.
Hyelin ChoiBarbara Davis Center for Diabetes, University of Colorado School of Medicine, Aurora, CO, USA.ORCID 0000-0003-3474-9290
Laura PyleBarbara Davis Center for Diabetes, University of Colorado School of Medicine, Aurora, CO, USA.ORCID 0000-0001-5577-8221
Liping YuBarbara Davis Center for Diabetes, University of Colorado School of Medicine, Aurora, CO, USA.ORCID 0000-0003-0664-2154
Marian J RewersBarbara Davis Center for Diabetes, University of Colorado School of Medicine, Aurora, CO, USA.ORCID 0000-0003-3829-9207
Maki NakayamaBarbara Davis Center for Diabetes, University of Colorado School of Medicine, Aurora, CO, USA.ORCID 0000-0002-0009-3687
Aaron W MichelsBarbara Davis Center for Diabetes, University of Colorado School of Medicine, Aurora, CO, USA.ORCID 0000-0003-3766-5244
University of Colorado Denver · USColorado School of Public Health · US

Funding

University of Colorado Anschutz Medical Campus DRCP30DK116073 · NIDDK · UNIVERSITY OF COLORADO DENVER · PI LORI SUSSEL · 2020 to 2026
$10.8M
Natural History of Pre-Diabetic Autoimmunity (DAISY)R01DK032493 · NIDDK · UNIVERSITY OF COLORADO DENVER · PI REWERS, MARIAN J · 1986 to 2024
$9.3M
Natural History of Pre-diabetic Autoimmunity (DAISY)R37DK032493 · NIDDK · UNIVERSITY OF COLORADO DENVER · PI REWERS, MARIAN J · 2001 to 2010
$8.0M
Multiple Autoantigens/Multiple Epitopes of Type 1DMR01DK032083 · NIDDK · UNIVERSITY OF COLORADO DENVER · PI MICHELS, AARON W · 1986 to 2025
$6.9M
Molecular Dissection of Insulin Targeting in Anti-Islet AutoimmunityR01DK099317 · NIDDK · UNIVERSITY OF COLORADO DENVER · PI AARON W MICHELS, Maki Nakayama · 2013 to 2026
$5.3M
Insulin Specific T Cell Response Shaped by Diabetes Protective MHC Class II MoleculesR01DK108868 · NIDDK · UNIVERSITY OF COLORADO DENVER · PI AARON W MICHELS · 2017 to 2026
$3.6M
Insulin Specific T and B cells in Type 1 DiabetesDP3DK110845 · NIDDK · UNIVERSITY OF COLORADO DENVER · PI CAMBIER, JOHN C, MICHELS, AARON W · 2016 to 2016
$1.7M
Autoantigens targeted by CD8 T cells in type 1 diabetes: from islets to bloodR56DK099317 · NIDDK · UNIVERSITY OF COLORADO DENVER · PI MICHELS, AARON W, NAKAYAMA, MAKI · 2019 to 2019
$194k
MULTIPLE AUTOANTIGENS OF PRETYPE I DMR37DK032083 · NIDDK · UNIVERSITY OF COLORADO DENVER · PI EISENBARTH, GEORGE S · 1992 to 1999
–
NIDDK NIH HHS DP3 DK110845NIDDK NIH HHS P30 DK116073NIDDK NIH HHS R01 DK032083NIDDK NIH HHS R01 DK032493NIDDK NIH HHS R01 DK099317NIDDK NIH HHS R01 DK108868NIDDK NIH HHS R37 DK032083NIDDK NIH HHS R37 DK032493NIDDK NIH HHS R56 DK099317
6 · The paper itself

Abstract

T cells targeting self-proteins are important mediators in autoimmune diseases. T cells express unique cell-surface receptors (TCRs) that recognize peptides presented by major histocompatibility molecules. TCRs have been identified from blood and pancreatic islets of individuals with type 1 diabetes (T1D). Here, we tracked ~1700 known antigen-specific TCR sequences, islet antigen or viral reactive, in bulk TCRβ sequencing from longitudinal blood DNA samples in at-risk cases who progressed to T1D, age/sex/human leukocyte antigen-matched controls, and a new-onset T1D cohort. Shared and frequent antigen-specific TCRβ sequences were identified in all three cohorts, and viral sequences were present across all ages. Islet sequences had different patterns of accumulation based upon antigen specificity in the at-risk cases. Furthermore, 73 islet-antigen TCRβ sequences were present in higher frequencies and numbers in T1D samples relative to controls. The total number of these disease-associated TCRβ sequences inversely correlated with age at clinical diagnosis, indicating the potential to use disease-relevant TCR sequences as biomarkers in autoimmune disorders.

Indexed as

Diabetes Mellitus, Type 1Islets of LangerhansHumansPeptidesReceptors, Antigen, T-CellT-LymphocytesPeptidesReceptors, Antigen, T-Cell

Identifiers

PMID38064552
PMCPMC10708189
OpenAlexW4389474764

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.