Evidence map›Paper›PMID 38063871›Full record

ArticleJournal of neurology2024

Frataxin analysis using triple quadrupole mass spectrometry: application to a large heterogeneous clinical cohort.

David R Lynch, Teerapat Rojsajjakul, S H Subramony, Susan L Perlman, Medina Keita, Clementina Mesaros, Ian A Blair

Open access · greenAbstract read
In one paragraph

Article in Journal of neurology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.6field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Long non-coding RNABrain communications · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

David R LynchPenn/CHOP Friedreich Ataxia Center of Excellence, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, 19104, USA. lynchd@pennmedicine.upenn.edu.ORCID http://orcid.org/0000-0001-7168-214X
Teerapat RojsajjakulPenn/CHOP Friedreich Ataxia Center of Excellence, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, 19104, USA.
S H SubramonyDepartment of Neurology, University of Florida, Gainesville, FL, 32608, USA.
Susan L PerlmanDepartment of Neurology, David Geffen School of Medicine, UCLA, Los Angeles, CA, 90095, USA.
Medina KeitaPenn/CHOP Friedreich Ataxia Center of Excellence, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, 19104, USA.
Clementina MesarosPenn/CHOP Friedreich Ataxia Center of Excellence, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, 19104, USA.
Ian A BlairPenn/CHOP Friedreich Ataxia Center of Excellence, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, 19104, USA.
Translational Therapeutics (United States) · USChildren's Hospital of Philadelphia · USUniversity of California, Los Angeles · USUniversity of Florida · US

Funding

Translational Research Support CoreP30ES013508 · NIEHS · UNIVERSITY OF PENNSYLVANIA · PI Rebecca A Simmons · 2006 to 2026
$35.3M
Analytical validation of frataxin proteoforms in blood as biomarkers of Friedreich's ataxiaU01NS114143 · NINDS · UNIVERSITY OF PENNSYLVANIA · PI BLAIR, IAN ALEXANDER, HWANG, WEI-TING · 2020 to 2024
$3.9M
NIEHS NIH HHS 5P30ES013508.NIEHS NIH HHS P30 ES013508NINDS NIH HHS U01 NS114143NINDS NIH HHS U01NS114143
6 · The paper itself

Abstract

backgroundFriedreich ataxia is a progressive multisystem disorder caused by deficiency of the protein frataxin; a small mitochondrial protein involved in iron sulfur cluster synthesis. Two types of frataxin exist: FXN-M, found in most cells, and FXN-E, found almost exclusively in red blood cells. Treatments in clinical trials include frataxin restoration by gene therapy, protein replacement, and epigenetic therapies, all of which necessitate sensitive assays for assessing frataxin levels.

methodsIn the present study, we have used a triple quadrupole mass spectrometry-based assay to examine the features of both types of frataxin levels in blood in a large heterogenous cohort of 106 patients with FRDA.

resultsFrataxin levels (FXN-E and FXN M) were predicted by GAA repeat length in regression models (R

conclusionThe present data show that assay of FXN-M and FXN-E levels in blood provides an appropriate biofluid for assessing their repletion in particular clinical contexts.

Indexed as

FrataxinFriedreich AtaxiaHumansIron-Binding ProteinsMass SpectrometryMitochondrial ProteinsFrataxinIron-Binding ProteinsMitochondrial ProteinsDisability statusFrataxin blood levelsFriedreich Ataxia Rating scaleGAA repeat lengthMitochondrial protein

Identifiers

PMID38063871
PMCPMC12327059
OpenAlexW4389480267

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.