Evidence map›Paper›PMID 38063811›Full record

ArticleAmerican journal of physiology. Heart and circulatory physiology2024

Differential sensitivity to longitudinal and transverse stretch mediates transcriptional responses in mouse neonatal ventricular myocytes.

Shulin Cao, Kyle S Buchholz, Philip Tan, Jennifer C Stowe, Ariel Wang, Annabelle Fowler, Katherine R Knaus, Ali Khalilimeybodi, Alexander C Zambon, Jeffrey H Omens and 2 more

Open access · greenAbstract read
In one paragraph

Article in American journal of physiology. Heart and circulatory physiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.7field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Shulin CaoDepartment of Bioengineering, University of California San Diego, La Jolla, California, United States.ORCID 0000-0002-2942-0186
Kyle S BuchholzDepartment of Bioengineering, University of California San Diego, La Jolla, California, United States.
Philip TanDepartment of Biomedical Engineering, University of Virginia, Charlottesville, Virginia, United States.ORCID 0000-0002-4108-5720
Jennifer C StoweDepartment of Bioengineering, University of California San Diego, La Jolla, California, United States.
Ariel WangDepartment of Bioengineering, University of California San Diego, La Jolla, California, United States.ORCID 0000-0001-7571-3724
Annabelle FowlerDepartment of Bioengineering, University of California San Diego, La Jolla, California, United States.
Katherine R KnausDepartment of Bioengineering, University of California San Diego, La Jolla, California, United States.ORCID 0000-0002-7300-0138
Ali KhalilimeybodiDepartment of Mechanical and Aerospace Engineering, University of California San Diego, La Jolla, California, United States.ORCID 0000-0001-9318-8433
Alexander C ZambonDepartment of Biopharmaceutical Sciences, Keck Graduate Institute, Claremont, California, United States.ORCID 0000-0001-7874-4462
Jeffrey H OmensDepartment of Bioengineering, University of California San Diego, La Jolla, California, United States.
Jeffrey J SaucermanDepartment of Biomedical Engineering, University of Virginia, Charlottesville, Virginia, United States.ORCID 0000-0001-9464-8374
Andrew D McCullochDepartment of Bioengineering, University of California San Diego, La Jolla, California, United States.ORCID 0000-0002-1708-5675
University of California San Diego · USUniversity of Virginia · USKeck Graduate Institute · US

Funding

National Biomedical Computation Resource - Competitive Revision SupplementP41GM103426 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI AMARO, ROMMIE E · 2012 to 2019
$14.0M
The Cardiac Atlas ProjectR01HL121754 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI MCCULLOCH, ANDREW D., OMENS, JEFFREY H. · 2014 to 2023
$5.0M
Predictive multiscale in silico cardio-pharmacologyU01HL126273 · NHLBI · UNIVERSITY OF CALIFORNIA AT DAVIS · PI CLANCY, COLLEEN E · 2015 to 2019
$3.8M
Multi-scale Systems Model of Murine Heart FailureR01HL105242 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI BERS, DONALD M, MCCULLOCH, ANDREW D. · 2012 to 2016
$3.5M
Analyzing the Cardiac Power Grid: Adaptive responses to fluctuating local demandU01HL122199 · NHLBI · UNIVERSITY OF WASHINGTON · PI BEARD, DANIEL A, DASH, RANJAN K · 2015 to 2019
$3.3M
Systems Pharmacology Model of Cardiac HypertrophyR01HL162925 · NHLBI · UNIVERSITY OF VIRGINIA · PI SAUCERMAN, JEFFREY J., WOLF, MATTHEW J · 2022 to 2025
$3.1M
Computational and Experimental Modeling of Cardiomyocyte ProliferationR01HL160665 · NHLBI · UNIVERSITY OF VIRGINIA · PI SAUCERMAN, JEFFREY J., VAN BERLO, JOHANNES (JOP) · 2022 to 2025
$2.8M
Systems Biology of Hypertrophic Heart Disease from Molecular Pathways to Organ SystemR01HL137100 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI MCCULLOCH, ANDREW D. · 2017 to 2020
$2.0M
NHLBI NIH HHS R01 HL105242NHLBI NIH HHS R01 HL121754NHLBI NIH HHS R01 HL137100NHLBI NIH HHS R01 HL160665NHLBI NIH HHS R01 HL162925NHLBI NIH HHS U01 HL122199NHLBI NIH HHS U01 HL126273NIGMS NIH HHS P41 GM103426
6 · The paper itself

Abstract

To identify how cardiomyocyte mechanosensitive signaling pathways are regulated by anisotropic stretch, micropatterned mouse neonatal cardiomyocytes were stretched primarily longitudinally or transversely to the myofiber axis. Four hours of static, longitudinal stretch induced differential expression of 557 genes, compared with 30 induced by transverse stretch, measured using RNA-seq. A logic-based ordinary differential equation model of the cardiac myocyte mechanosignaling network, extended to include the transcriptional regulation and expression of 784 genes, correctly predicted measured expression changes due to anisotropic stretch with 69% accuracy. The model also predicted published transcriptional responses to mechanical load in vitro or in vivo with 63-91% accuracy. The observed differences between transverse and longitudinal stretch responses were not explained by differential activation of specific pathways but rather by an approximately twofold greater sensitivity to longitudinal stretch than transverse stretch. In vitro experiments confirmed model predictions that stretch-induced gene expression is more sensitive to angiotensin II and endothelin-1, via RhoA and MAP kinases, than to the three membrane ion channels upstream of calcium signaling in the network. Quantitative cardiomyocyte gene expression differs substantially with the axis of maximum principal stretch relative to the myofilament axis, but this difference is due primarily to differences in stretch sensitivity rather than to selective activation of mechanosignaling pathways.

Indexed as

Myocytes, CardiacSignal TransductionAngiotensin IIAnimalsCells, CulturedGene Expression RegulationMiceMitogen-Activated Protein KinasesStress, MechanicalAngiotensin IIMitogen-Activated Protein Kinasescardiac myocytemechanosignaling networknetwork modelstretchtranscriptional regulation

Identifiers

PMID38063811
PMCPMC11245882
OpenAlexW4389489921

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.