Evidence map›Paper›PMID 38063424›Full record

ArticlemBio2024

Bile acid fitness determinants of a

Aretha Fiebig, Matthew K Schnizlein, Selymar Pena-Rivera, Florian Trigodet, Abhishek Anil Dubey, Miette K Hennessy, Anindita Basu, Sebastian Pott, Sushila Dalal, David Rubin and 4 more

Abstract read
In one paragraph

Article in mBio, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. High-throughput analyses ofGut microbes · 2026
    Article
  2. Review
  3. Article
  4. Article
  5. Gene regulation inMicrobiology and molecular biology reviews : MMBR · 2025
    Review
  6. Article
  7. Phenotypic and phylogenetic analyses ofJournal of medical microbiology · 2025
    Article
  8. Genetic- and culture-based tools for studyingMicrobiology resource announcements · 2025
    Article
  9. DNA repair is essential forJournal of bacteriology · 2025
    Article
  10. Article
  11. DNA repair is essential forbioRxiv : the preprint server for biology · 2025
    Article
  12. Article
  13. Article
  14. Article
  15. Microbially-catalyzed conjugation of GABA and tyramine to bile acids.bioRxiv : the preprint server for biology · 2023
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

14 authors.

Aretha FiebigDepartment of Microbiology and Molecular Genetics, Michigan State University, East Lansing, Michigan, USA.ORCID 0000-0002-0612-5029
Matthew K SchnizleinDepartment of Microbiology and Molecular Genetics, Michigan State University, East Lansing, Michigan, USA.
Selymar Pena-RiveraDepartment of Microbiology and Molecular Genetics, Michigan State University, East Lansing, Michigan, USA.
Florian TrigodetDepartment of Medicine, University of Chicago, Chicago, Illinois, USA.
Abhishek Anil DubeyDepartment of Microbiology and Molecular Genetics, Michigan State University, East Lansing, Michigan, USA.
Miette K HennessyDepartment of Microbiology and Molecular Genetics, Michigan State University, East Lansing, Michigan, USA.
Anindita BasuDepartment of Medicine, University of Chicago, Chicago, Illinois, USA.
Sebastian PottDepartment of Medicine, University of Chicago, Chicago, Illinois, USA.
Sushila DalalDepartment of Medicine, University of Chicago, Chicago, Illinois, USA.
David RubinDepartment of Medicine, University of Chicago, Chicago, Illinois, USA.
Mitchell L SoginMarine Biological Laboratory, Woods Hole, Massachusetts, USA.ORCID 0000-0002-7196-6991
A Murat ErenDepartment of Medicine, University of Chicago, Chicago, Illinois, USA.ORCID 0000-0001-9013-4827
Eugene B ChangDepartment of Medicine, University of Chicago, Chicago, Illinois, USA.
Sean CrossonDepartment of Microbiology and Molecular Genetics, Michigan State University, East Lansing, Michigan, USA.ORCID 0000-0002-1727-322X

Funding

ULTRASTRUCTURE AND CYTOMORPHOLOGY COREP30DK042086 · NIDDK · UNIVERSITY OF CHICAGO · PI CHANG, EUGENE B · 1990 to 2025
$29.8M
Host and microbial basis of human ulcerative colitis and pouchitis: Identification, role, mechanisms, and resource development of host susceptibility and pathobiont factorsRC2DK122394 · NIDDK · UNIVERSITY OF CHICAGO · PI CHANG, EUGENE B · 2019 to 2023
$10.2M
Molecular mechanisms controlling stress responses and cell adhesion in bacteriaR35GM131762 · NIGMS · MICHIGAN STATE UNIVERSITY · PI Sean Crosson · 2019 to 2026
$3.2M
Probing short and long term consequences of Small and Large Bowel Microbiota Transplants on Host Physiology: Implications for the development of future live biotherapeuticsR01DK138072 · NIDDK · UNIVERSITY OF CHICAGO · PI EUGENE B CHANG, Kristina Brooke Martinez-Guryn · 2024 to 2026
$2.1M
NIDDK NIH HHS P30 DK042086NIDDK NIH HHS R01 DK138072NIDDK NIH HHS RC2 DK122394NIGMS NIH HHS R35 GM131762
6 · The paper itself

Abstract

importanceThe Gram-negative bacterium

Indexed as

Bacteroides fragilisPouchitisBileBile Acids and SaltsHumansInflammationBile Acids and SaltsBacteroides fragilisbilecell envelopedeoxycholatepouchitisstress responseTn-seq

Identifiers

PMID38063424
PMCPMC10790697

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.