Evidence map›Paper›PMID 38063074›Full record

ArticleJournal of materials chemistry. B2024

Sensitive monitoring of NAD(P)H levels within cancer cells using mitochondria-targeted near-infrared cyanine dyes with optimized electron-withdrawing acceptors.

Dilka Liyana Arachchige, Sushil K Dwivedi, May Waters, Sophia Jaeger, Joe Peters, Daniel R Tucker, Micaela Geborkoff, Thomas Werner, Rudy L Luck, Bhaskar Godugu and 1 more

Open access · greenAbstract read
In one paragraph

Article in Journal of materials chemistry. B, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 18 citations in OpenAlex.

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  9. Dynamic insights into mitochondrial function: Monitoring viscosity and SOJournal of photochemistry and photobiology. B, Biology · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Dilka Liyana ArachchigeDepartment of Chemistry, Michigan Technological University, Houghton, MI 49931, USA. rluck@mtu.edu.
Sushil K DwivediDepartment of Chemistry, Michigan Technological University, Houghton, MI 49931, USA. rluck@mtu.edu.
May WatersDepartment of Chemistry, Michigan Technological University, Houghton, MI 49931, USA. rluck@mtu.edu.
Sophia JaegerDepartment of Chemistry, Michigan Technological University, Houghton, MI 49931, USA. rluck@mtu.edu.
Joe PetersDepartment of Chemistry, Michigan Technological University, Houghton, MI 49931, USA. rluck@mtu.edu.
Daniel R TuckerDepartment of Chemistry, Michigan Technological University, Houghton, MI 49931, USA. rluck@mtu.edu.
Micaela GeborkoffDepartment of Biological Sciences, Michigan Technological University, Houghton, MI 49931, USA.
Thomas WernerDepartment of Biological Sciences, Michigan Technological University, Houghton, MI 49931, USA.
Rudy L LuckDepartment of Chemistry, Michigan Technological University, Houghton, MI 49931, USA. rluck@mtu.edu.ORCID 0000-0001-5436-1942
Bhaskar GoduguDepartment of Chemistry, University of Pittsburgh, Chevron Science Center, 219 Parkman Avenue, Pittsburgh, PA 15260, USA.
Haiying LiuDepartment of Chemistry, Michigan Technological University, Houghton, MI 49931, USA. rluck@mtu.edu.ORCID 0000-0001-8351-2017
Michigan Technological University · USUniversity of Pittsburgh · US

Funding

Ratiometric Near-infrared Fluorescent Probes for Lysosomal pH in Living CellsR15GM114751 · NIGMS · MICHIGAN TECHNOLOGICAL UNIVERSITY · PI LIU, HAIYING · 2015 to 2019
$798k
Near-infrared Fluorescent Probes for Sensitive Detection of NADH in Live CellsR15GM146206 · NIGMS · MICHIGAN TECHNOLOGICAL UNIVERSITY · PI LIU, HAIYING · 2022 to 2024
$588k
Preparative binary pump HPLC system with UV and refractive index detector capabilitiesR15GM152969 · NIGMS · MICHIGAN TECHNOLOGICAL UNIVERSITY · PI LUCK, RUDY LIN · 2023 to 2024
$547k
NIGMS NIH HHS R15 GM114751NIGMS NIH HHS R15 GM146206NIGMS NIH HHS R15 GM152969
6 · The paper itself

Abstract

A series of near-infrared fluorescent probes, labeled A to E, were developed by combining electron-rich thiophene and 3,4-ethylenedioxythiophene bridges with 3-quinolinium and various electron deficient groups, enabling the sensing of NAD(P)H. Probes A and B exhibit absorptions and emissions in the near-infrared range, offering advantages such as minimal interference from autofluorescence, negligible photo impairment in cells and tissues, and exceptional tissue penetration. These probes show negligible fluorescence when NADH is not present, and their absorption maxima are at 438 nm and 470 nm, respectively. In contrast, probes C-E feature absorption maxima at 450, 334 and 581 nm, respectively. Added NADH triggers the transformation of the electron-deficient 3-quinolinium units into electron-rich 1,4-dihydroquinoline units resulting in fluorescence responses which were established at 748, 730, 575, 625 and 661 for probes AH-EH, respectively, at detection limits of 0.15 μM and 0.07 μM for probes A and B, respectively. Optimized geometries based on theoretical calculations reveal non-planar geometries for probes A-E due to twisting of the 3-quinolinium and benzothiazolium units bonded to the central thiophene group, which all attain planarity upon addition of hydride resulting in absorption and fluorescence in the near-IR region for probes AH and BH in contrast to probes CH-EH which depict fluorescence in the visible range. Probe A has been successfully employed to monitor NAD(P)H levels in glycolysis and specific mitochondrial targeting. Furthermore, it has been used to assess the influence of lactate and pyruvate on the levels of NAD(P)H, to explore how hypoxia in cancer cells can elevate levels of NAD(P)H, and to visualize changes in levels of NAD(P)H under hypoxic conditions with CoCl

Indexed as

NADNeoplasmsAnimalsCisplatinDrosophila melanogasterElectronsFluorescent DyesMitochondriaPyruvic AcidThiophenesCisplatinFluorescent DyesNADPyruvic AcidThiophenes

Identifiers

PMID38063074
PMCPMC10918806
OpenAlexW4389472024

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.