Evidence map›Paper›PMID 38062233›Full record

ArticleScientific reports2023

Machine learning algorithms for a novel cuproptosis-related gene signature of diagnostic and immune infiltration in endometriosis.

Jiajia Wang, Yiming Lu, Guangyu Sun, Zhihao Fang, Zhiyong Xing, Weihua Nong, Yunbao Wei, Shan Wang, Guiling Shi, Mingyou Dong and 1 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.1field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Jiajia Wang *Department of Obstetrics and Gynecology, The Affiliated Hospital of Youjiang Medical University for Nationalities, Baise, 533000, China.
Yiming Lu *Graduate School of Youjiang, Medical University for Nationalities, Baise, 533000, China.
Guangyu SunChaozhou People's Hospital, Shantou University Medical College, Chaozhou, 515600, China.
Zhihao FangChaozhou People's Hospital, Shantou University Medical College, Chaozhou, 515600, China.
Zhiyong XingSchool of Medical Laboratory, Youjiang Medical University for Nationalities, Baise, 533000, China.
Weihua NongDepartment of Obstetrics and Gynecology, The Affiliated Hospital of Youjiang Medical University for Nationalities, Baise, 533000, China.
Yunbao WeiDepartment of Obstetrics and Gynecology, The Affiliated Hospital of Youjiang Medical University for Nationalities, Baise, 533000, China.
Shan WangDepartment of Stomatology, The Affiliated Hospital of Youjiang Medical University for Nationalities, Baise, 533000, China.
Guiling ShiDepartment of Obstetrics and Gynecology, The Affiliated Hospital of Youjiang Medical University for Nationalities, Baise, 533000, China.
Mingyou DongSchool of Medical Laboratory, Youjiang Medical University for Nationalities, Baise, 533000, China. mydong@ymcn.edu.cn.
Junli WangSchool of Medical Laboratory, Youjiang Medical University for Nationalities, Baise, 533000, China. baisewangjunli@163.com.
Affiliated Hospital of Youjiang Medical University for Nationalities · CNHanshan Normal University · CNShantou University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Endometriosis (EMT) is an aggressive disease of the reproductive system, also called "benign cancer". However, effective treatments for EMT are still lacking in clinical practice. Interestingly, immune infiltration is significantly involved in EMT pathogenesis. Currently, no studies have shown the involvement of cuproptosis-related genes (CRGs) in regulating immune infiltration in EMT. This study identified three CRGs such as GLS, NFE2L2, and PDHA1, associated with EMT using machine learning algorithms. These three CRGs were upregulated in the endometrium of patients with moderate/severe EMT and downregulated in patients with infertility. Single sample genomic enrichment analysis (ssGSEA) revealed that these CRGs were closely correlated with autoimmune diseases such as systemic lupus erythematosus. Furthermore, these CRGs were correlated with immune cells such as eosinophils, natural killer cells, and macrophages. Therefore, profiling patients based on these genes aid in a more accurate diagnosis of EMT progression. The mRNA and protein expression levels of GLS, NFE2L2 and PDHA1 were validated by qRT-PCR and WB studies in EMT samples. These findings provide a new idea for the pathology and treatment of endometriosis, suggesting that CRGs such as GLS, NFE2L2 and PDHA1 may play a key role in the occurrence and development of endometriosis.

Indexed as

Autoimmune DiseasesEndometriosisAggressionAlgorithmsFemaleHumansMachine Learning

Identifiers

PMID38062233
PMCPMC10703883
OpenAlexW4389436577

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.