Evidence map›Paper›PMID 38062210›Full record

ArticleInternational microbiology : the official journal of the Spanish Society for Microbiology2024

The abundance of comammox bacteria was higher than that of ammonia-oxidizing archaea and bacteria in rhizosphere of emergent macrophytes in a typical shallow lake riparian.

Jiahui Zhang, Mingzhi Zhou, Fengning Shi, Ziyan Lei, Yuchun Wang, Mingming Hu, Jianwei Zhao

Abstract read
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In one paragraph

Article in International microbiology : the official journal of the Spanish Society for Microbiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Jiahui Zhang *State Key Laboratory of Simulation and Regulation of Water Cycle in River Basin, Beijing, 100038, China.
Mingzhi Zhou *Laboratory of Eco-Environmental Engineering Research, Key Laboratory of Arable Land Conservation (Middle and Lower Reaches of Yangtze River), Ministry of Agriculture, Huazhong Agricultural University, No.1, Shizishan Street, Hongshan District, Wuhan, 430070, People's Republic of China.
Fengning ShiYunnan Hydrology and Water Resources Bureau, Kunming, 650100, China.
Ziyan LeiLaboratory of Eco-Environmental Engineering Research, Key Laboratory of Arable Land Conservation (Middle and Lower Reaches of Yangtze River), Ministry of Agriculture, Huazhong Agricultural University, No.1, Shizishan Street, Hongshan District, Wuhan, 430070, People's Republic of China.
Yuchun WangState Key Laboratory of Simulation and Regulation of Water Cycle in River Basin, Beijing, 100038, China.
Mingming HuState Key Laboratory of Simulation and Regulation of Water Cycle in River Basin, Beijing, 100038, China. hmmkeke@163.com.ORCID http://orcid.org/0000-0002-7661-2519
Jianwei ZhaoLaboratory of Eco-Environmental Engineering Research, Key Laboratory of Arable Land Conservation (Middle and Lower Reaches of Yangtze River), Ministry of Agriculture, Huazhong Agricultural University, No.1, Shizishan Street, Hongshan District, Wuhan, 430070, People's Republic of China. jwzhao2@163.com.ORCID http://orcid.org/0000-0003-1465-6134

Funding

National Natural Science Foundation of China 42177383National Natural Science Foundation of China 51679258National Natural Science Foundation of China 92047204National Natural Science Foundation of China U1802241National Natural Science Foundation of China U2040211the State Key Laboratory of Simulation and Regulation of Water Cycle in River Basin SKL2020TS07
6 · The paper itself

Abstract

Complete ammonia oxidation (comammox) bacteria can complete the whole nitrification process independently, which not only challenges the classical two-step nitrification theory but also updates long-held perspective of microbial ecological relationship in nitrification process. Although comammox bacteria have been found in many ecosystems in recent years, there is still a lack of research on the comammox process in rhizosphere of emergent macrophytes in lakeshore zone. Sediment samples were collected in this study from rhizosphere, far-rhizosphere, and non-rhizosphere of emergent macrophytes along the shore of Lake Liangzi, a shallow lake. The diversity of comammox bacteria and amoA gene abundance of comammox bacteria, ammonia-oxidizing archaea (AOA), and ammonia-oxidizing bacteria (AOB) in these samples were measured. The results showed that comammox bacteria widely existed in the rhizosphere of emergent macrophytes and fell into clade A.1, clade A.2, and clade B, and clade A was the predominant community in all sampling sites. The abundance of comammox amoA gene (6.52 × 10

Indexed as

AmmoniaArchaeaBacteriaEcosystemLakesOxidation-ReductionPhylogenyRhizosphereSoil MicrobiologyAmmoniaAmmonia-oxidizing archaeaAmmonia-oxidizing bacteriaComammoxEmergent macrophytesLakeshore zoneRhizosphere

Identifiers

PMID38062210

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.