Evidence map›Paper›PMID 38062199›Full record

ArticleScientific reports2023

A pan-cancer analysis of anti-proliferative protein family genes for therapeutic targets in cancer.

Siming Zhang, Jue Gu, Ling-Ling Shi, Bo Qian, Xun Diao, Xiaohui Jiang, Jindong Wu, Zhijun Wu, Aiguo Shen

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
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  7. Article
  8. Review
  9. Genetic tapestry of Capsicum fruit colors: a comparative analysis of four cultivated species.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024
    Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Siming Zhang *Cancer Research Center Nantong, Nantong Tumor Hospital and Affiliated Tumor Hospital of Nantong University, Nantong, Jiangsu, China.
Jue Gu *Affiliated Hospital of Nantong University, Nantong, China.
Ling-Ling Shi *Affiliated Nantong Hospital Third of Nantong University, Nantong, China.
Bo QianMaternal and Child Care Hospital of Qidong, Nantong, China.
Xun DiaoCancer Research Center Nantong, Nantong Tumor Hospital and Affiliated Tumor Hospital of Nantong University, Nantong, Jiangsu, China.
Xiaohui JiangDepartment of General Surgery, Nantong Tumor Hospital and Affiliated Tumor Hospital of Nantong University, Nantong, China.
Jindong WuDepartment of General Surgery, Nantong Tumor Hospital and Affiliated Tumor Hospital of Nantong University, Nantong, China.
Zhijun WuDepartment of Oncology, Nantong Traditional Chinese Medicine Hospital, Nantong, China. wuzhijun@ntu.edu.cn.
Aiguo ShenCancer Research Center Nantong, Nantong Tumor Hospital and Affiliated Tumor Hospital of Nantong University, Nantong, Jiangsu, China. aiguoshen_nt@126.com.
Nantong University · CNAffiliated Hospital of Nantong University · CNNantong Tumor Hospital · CNAnyang Hospital of Traditional Chinese Medicine · CN

Funding

Health Committee of Nantong QA2020018Health Committee of Nantong QN2022030Nantong Science and Technology Foundation JCZ21112Nantong Science and Technology Foundation MS2022041
6 · The paper itself

Abstract

The recently discovered APRO (anti-proliferative protein) family encodes a group of trans-membrane glycoproteins and includes 6 members: TOB1, TOB2, BTG1, BTG2, BTG3 and BTG4. The APRO family is reportedly associated with the initiation and progression of cancers. This study aims to undertake a comprehensive investigation of the APRO family of proteins as a prognostic biomarker in various human tumors. We performed a pan-cancer analysis of the APRO family based on The Cancer Genome Atlas (TCGA). With the bioinformatics methods, we explored the prognostic value of the APRO family and the correlation between APRO family expression and tumor mutation burden (TMB), microsatellite instability (MSI), drug sensitivity, and immunotherapy in numerous cancers. Our results show that the APRO family was primarily down-regulated in cancer samples. The expression of APRO family members was linked with patient prognosis. In addition, APRO family genes showed significant association with immune infiltrate subtypes, tumor microenvironment, and tumor cell stemness. Finally, our study also demonstrated the relationship between APRO family genes and drug sensitivity. This study provides comprehensive information to understand the APRO family's role as an oncogene and predictor of survival in some tumor types.

Indexed as

Immediate-Early ProteinsNeoplasmsCognitionComputational BiologyHumansImmunotherapyOncogenesTumor MicroenvironmentTumor Suppressor ProteinsBTG2 protein, humanImmediate-Early ProteinsTumor Suppressor Proteins

Identifiers

PMID38062199
PMCPMC10703880
OpenAlexW4389435344

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.