Evidence map›Paper›PMID 38060984›Full record

ArticleThe Plant cell2024

Two ARGONAUTE proteins loaded with transposon-derived small RNAs are associated with the reproductive cell lineage in Arabidopsis.

Gabriele Bradamante, Vu Hoang Nguyen, Marco Incarbone, Zohar Meir, Heinrich Bente, Mattia Donà, Nicole Lettner, Ortrun Mittelsten Scheid, Ruben Gutzat

Open access · hybridAbstract read
In one paragraph

Article in The Plant cell, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
9.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Spatial variation in the mutation rate within the plant shoot apical meristem.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Male Germ Cell Specification in Plants.International journal of molecular sciences · 2024
    Review
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Gabriele BradamanteAustrian Academy of Sciences, Vienna Biocenter (VBC), Gregor Mendel Institute of Molecular Plant Biology, 1030 Vienna, Austria.ORCID 0000-0002-7785-8131
Vu Hoang NguyenAustrian Academy of Sciences, Vienna Biocenter (VBC), Gregor Mendel Institute of Molecular Plant Biology, 1030 Vienna, Austria.ORCID 0000-0003-0855-8845
Marco IncarboneAustrian Academy of Sciences, Vienna Biocenter (VBC), Gregor Mendel Institute of Molecular Plant Biology, 1030 Vienna, Austria.ORCID 0000-0002-0677-8505
Zohar MeirFaculty of Mathematics and Computer Science & Department of Plant and Environmental Sciences, Weizmann Institute of Science, 7610001 Rehovot, Israel.ORCID 0000-0002-3062-6536
Heinrich BenteAustrian Academy of Sciences, Vienna Biocenter (VBC), Gregor Mendel Institute of Molecular Plant Biology, 1030 Vienna, Austria.ORCID 0000-0001-9229-5149
Mattia DonàAustrian Academy of Sciences, Vienna Biocenter (VBC), Gregor Mendel Institute of Molecular Plant Biology, 1030 Vienna, Austria.ORCID 0000-0002-0812-7319
Nicole LettnerAustrian Academy of Sciences, Vienna Biocenter (VBC), Gregor Mendel Institute of Molecular Plant Biology, 1030 Vienna, Austria.ORCID 0009-0002-4555-4587
Ortrun Mittelsten ScheidAustrian Academy of Sciences, Vienna Biocenter (VBC), Gregor Mendel Institute of Molecular Plant Biology, 1030 Vienna, Austria.ORCID 0000-0002-7757-4809
Ruben GutzatAustrian Academy of Sciences, Vienna Biocenter (VBC), Gregor Mendel Institute of Molecular Plant Biology, 1030 Vienna, Austria.ORCID 0000-0002-4746-7201
Gregor Mendel Institute of Molecular Plant Biology · ATWeizmann Institute of Science · IL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In sexually propagating organisms, genetic, and epigenetic mutations are evolutionarily relevant only if they occur in the germline and are hence transmitted to the next generation. In contrast to most animals, plants are considered to lack an early segregating germline, implying that somatic cells can contribute genetic information to progeny. Here we demonstrate that 2 ARGONAUTE proteins, AGO5 and AGO9, mark cells associated with sexual reproduction in Arabidopsis (Arabidopsis thaliana) throughout development. Both AGOs are loaded with dynamically changing small RNA populations derived from highly methylated, pericentromeric, long transposons. Sequencing of single stem cell nuclei revealed that many of these transposons are co-expressed within an AGO5/9 expression domain in the shoot apical meristem (SAM). Co-occurrence of transposon expression and specific ARGONAUTE (AGO) expression in the SAM is reminiscent of germline features in animals and supports the existence of an early segregating germline in plants. Our results open the path to investigating transposon biology and epigenome dynamics at cellular resolution in the SAM stem cell niche.

Indexed as

ArabidopsisArabidopsis ProteinsAnimalsArgonaute ProteinsCell LineageGene Expression Regulation, PlantMeristemPlantsReproductionRNA, PlantAGO9 protein, ArabidopsisArabidopsis ProteinsArgonaute ProteinsRNA, Plant

Identifiers

PMID38060984
PMCPMC10980394
OpenAlexW4389426473

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.