Evidence map›Paper›PMID 38060678›Full record

ArticlePlant physiology2024

Starch phosphorylation regulates starch granule morphological homogeneity in Arabidopsis thaliana.

Xiaoping Li, Abubakar Musa Ahmad, Yuyue Zhong, Li Ding, Andreas Blennow, Joerg Fettke

Open access · hybridAbstract read
In one paragraph

Article in Plant physiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Xiaoping LiBiopolymer Analytics, Institute of Biochemistry and Biology, University of Potsdam, Potsdam-Golm 14776, Germany.ORCID 0000-0002-6930-4956
Abubakar Musa AhmadBiopolymer Analytics, Institute of Biochemistry and Biology, University of Potsdam, Potsdam-Golm 14776, Germany.ORCID 0009-0001-4944-1371
Yuyue ZhongDepartment of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen, Frederiksberg C 1871, Denmark.ORCID 0000-0002-5455-1030
Li DingDepartment of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen, Frederiksberg C 1871, Denmark.ORCID 0000-0002-6079-5760
Andreas BlennowDepartment of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen, Frederiksberg C 1871, Denmark.ORCID 0000-0001-6476-9546
Joerg FettkeBiopolymer Analytics, Institute of Biochemistry and Biology, University of Potsdam, Potsdam-Golm 14776, Germany.ORCID 0000-0003-0137-7611
University of Copenhagen · DKUniversity of Potsdam · DE

Funding

Deutsche Forschungsgemeinschaft DFG-FE 1030/5-1
6 · The paper itself

Abstract

Starch granule morphological homogeneity presents a gap in starch research. Transitory starch granules in wild-type plants are discoid, regardless of species. Notably, while the shape of starch granules can differ among mutants, it typically remains homogeneous within a genotype. We found an Arabidopsis thaliana mutant, dpe2sex4, lacking both the cytosolic disproportionating enzyme 2 (DPE2) and glucan phosphatase SEX4, showing an unprecedented bimodal starch granule diameter distribution when grown under a light/dark rhythm. dpe2sex4 contained 2 types of starch granules: large granules and small granules. In contrast to the double starch initiation in wheat (Triticum aestivum) endosperm, where A-type granules are initiated first and B-type granules are initiated later, dpe2sex4 small and large granules developed simultaneously in the same chloroplast. Compared with the large granules, the small granules had more branched amylopectin and less surface starch-phosphate, thus having a more compact structure that may hinder starch synthesis. During plant aging, the small granules barely grew. In in vitro experiments, fewer glucosyl residues were incorporated in small granules. Under continuous light, dpe2sex4 starch granules were morphologically homogeneous. Omitting the dark phase after a 2-wk light/dark cycle by moving plants into continuous light also reduced morphological variance between these 2 types of granules. These data shed light on the impact of starch phosphorylation on starch granule morphology homogeneity.

Indexed as

ArabidopsisArabidopsis ProteinsDual-Specificity PhosphatasesMutationPhosphorylationStarchArabidopsis ProteinsAt3g52180 protein, ArabidopsisDual-Specificity PhosphatasesStarch

Identifiers

PMID38060678
PMCPMC10980398
OpenAlexW4389455529

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.