Evidence map›Paper›PMID 38060626›Full record

ArticlePLoS biology2023

Collective production of hydrogen sulfide gas enables budding yeast lacking MET17 to overcome their metabolic defect.

Sonal, Alex E Yuan, Xueqin Yang, Wenying Shou

Abstract read
In one paragraph

Article in PLoS biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

SonalCentre for Life's Origins and Evolution, Department of Genetics, Evolution and Environment, University College London, London, United Kingdom.ORCID 0000-0002-2361-4131
Alex E YuanUniversity of Washington, Seattle, Washington, United States of America.ORCID 0000-0002-8972-7497
Xueqin YangSchool of Environmental Science and Engineering, Sun Yat-sen University, Guangzhou, China.ORCID 0000-0002-3638-2720
Wenying ShouCentre for Life's Origins and Evolution, Department of Genetics, Evolution and Environment, University College London, London, United Kingdom.ORCID 0000-0001-5693-381X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Assimilation of sulfur is vital to all organisms. In S. cerevisiae, inorganic sulfate is first reduced to sulfide, which is then affixed to an organic carbon backbone by the Met17 enzyme. The resulting homocysteine can then be converted to all other essential organosulfurs such as methionine, cysteine, and glutathione. This pathway has been known for nearly half a century, and met17 mutants have long been classified as organosulfur auxotrophs, which are unable to grow on sulfate as their sole sulfur source. Surprisingly, we found that met17Δ could grow on sulfate, albeit only at sufficiently high cell densities. We show that the accumulation of hydrogen sulfide gas underpins this density-dependent growth of met17Δ on sulfate and that the locus YLL058W (HSU1) enables met17Δ cells to assimilate hydrogen sulfide. Hsu1 protein is induced during sulfur starvation and under exposure to high sulfide concentrations in wild-type cells, and the gene has a pleiotropic role in sulfur assimilation. In a mathematical model, the low efficiency of sulfide assimilation in met17Δ can explain the observed density-dependent growth of met17Δ on sulfate. Thus, having uncovered and explained the paradoxical growth of a commonly used "auxotroph," our findings may impact the design of future studies in yeast genetics, metabolism, and volatile-mediated microbial interactions.

Indexed as

Cysteine SynthaseHydrogen SulfideSaccharomyces cerevisiae ProteinsGene DeletionModels, BiologicalSaccharomyces cerevisiaeSulfatesCysteine SynthaseHydrogen SulfideMET17 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsSulfatesYLL058W protein, S cerevisiae

Identifiers

PMID38060626
PMCPMC10729969

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.