Evidence map›Paper›PMID 38060597›Full record

ArticlePloS one2023

Transcriptome and metabolomics analysis of adaptive mechanism of Chinese mitten crab (Eriocheir sinensis) to aflatoxin B1.

Hongsheng Yang, Meifang Shen, Qiuyun Zhang, Yifeng Li, Xiuhui Tan, Xuguang Li, Huimin Chen, Lei Wu, Shaofang He, Xiaohua Zhu

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
1.6field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 4 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Hongsheng YangFishery Analysis and Testing Center of Jiangsu Province, Nanjing, Jiangsu, China.
Meifang ShenFishery Analysis and Testing Center of Jiangsu Province, Nanjing, Jiangsu, China.
Qiuyun ZhangFreshwater Fisheries Research Institute of Jiangsu Province, Nanjing, Jiangsu, China.
Yifeng LiCollege of Aquatic and Life Sciences, Shanghai Ocean University, Shanghai, China.
Xiuhui TanFreshwater Fisheries Research Institute of Jiangsu Province, Nanjing, Jiangsu, China.
Xuguang LiFreshwater Fisheries Research Institute of Jiangsu Province, Nanjing, Jiangsu, China.
Huimin ChenSCIEX Analytical Instrument Trading Co., Shanghai, China.
Lei WuYitian Technologies Corporation, Nanjing, Jiangsu, China.
Shaofang HeYitian Technologies Corporation, Nanjing, Jiangsu, China.
Xiaohua ZhuFishery Analysis and Testing Center of Jiangsu Province, Nanjing, Jiangsu, China.ORCID 0000-0002-8595-5783
Shandong Freshwater Fisheries Research Institute · CNJiangsu Province Blood Center · CNShanghai Ocean University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Aflatoxin B1 (AFB1), with the strong toxicity and carcinogenicity, has been reported to great toxicity to the liver and other organs of animals. It cause huge economic losses to breeding industry, including the aquaculture industry. Chinese mitten crabs (Eriocheir sinensis), as one of important species of freshwater aquaculture in China, are deeply disturbed by it. However, the molecular and metabolic mechanisms of hepatopancreas and ovary in crabs underlying coping ability are still unclear. Hence, we conducted targeted injection experiment with or without AFB1, and comprehensively analyzed transcriptome and metabolomics of hepatopancreas and ovary. As a result, 210 and 250 DEGs were identified in the L-C vs. L-30 m and L-C vs. L-60 m comparison, among which 14 common DEGs were related to six major functional categories, including antibacterial and detoxification, ATP energy reaction, redox reaction, nerve reaction, liver injury repair and immune reaction. A total of 228 and 401 DAMs in the ML-C vs. ML-30 m and ML-C vs. ML-60 m comparison both enriched 12 pathways, with clear functions of cutin, suberine and wax biosynthesis, tyrosine metabolism, purine metabolism, nucleotide metabolism, glycine, serine and threonine metabolism, ABC transporters and tryptophan metabolism. Integrated analysis of metabolomics and transcriptome in hepatopancreas discovered three Co-enriched pathways, including steroid biosynthesis, glycine, serine and threonine metabolism, and sphingolipid metabolism. In summary, the expression levels and functions of related genes and metabolites reveal the regulatory mechanism of Chinese mitten crab (Eriocheir sinensis) adaptability to the Aflatoxin B1, and the findings contribute to a new perspective for understanding Aflatoxin B1 and provide some ideas for dealing with it.

Indexed as

BrachyuraTranscriptomeAflatoxin B1AnimalsFemaleGlycineHepatopancreasPlant BreedingSerineThreonineAflatoxin B1GlycineSerineThreonine

Identifiers

PMID38060597
PMCPMC10703319
OpenAlexW4389429713

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.