Evidence map›Paper›PMID 38060314›Full record

ArticleJCI insight2024

CRISPR screening identifies BET and mTOR inhibitor synergy in cholangiocarcinoma through serine glycine one carbon.

Yan Zhu, Dengyong Zhang, Pooja Shukla, Young-Ho Jung, Prit Benny Malgulwar, Sharmeen Chagani, Medina Colic, Sarah Benjamin, John A Copland, Lin Tan and 6 more

Open access · goldAbstract read
In one paragraph

Article in JCI insight, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.8field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 5 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 3 institutions in 3 countries.

Yan ZhuDepartment of Translational Molecular Pathology, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.
Dengyong ZhangDepartment of Translational Molecular Pathology, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.
Pooja ShuklaDepartment of Translational Molecular Pathology, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.
Young-Ho JungDepartment of Translational Molecular Pathology, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.
Prit Benny MalgulwarDepartment of Translational Molecular Pathology, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.
Sharmeen ChaganiDepartment of Translational Molecular Pathology, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.
Medina ColicDepartment of Bioinformatics and Computational Biology, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.
Sarah BenjaminDepartment of Natural Sciences, Rice University, Houston, Texas, USA.
John A CoplandDepartment of Cancer Biology, Mayo Clinic Jacksonville, Florida, USA.
Lin TanMetabolomics Core Facility, Department of Bioinformatics & Computational Biology.
Philip L LorenziMetabolomics Core Facility, Department of Bioinformatics & Computational Biology.
Milind JavleDepartment of Gastrointestinal Medical Oncology.
Jason T HuseDepartment of Translational Molecular Pathology, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.
Jason RoszikDepartment of Melanoma Medical Oncology-Research, Division of Cancer Medicine.
Traver HartDepartment of Bioinformatics and Computational Biology, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.
Lawrence N KwongDepartment of Translational Molecular Pathology, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.
The University of Texas MD Anderson Cancer Center · USJacksonville College · USRice University · US

Funding

Optimizing Detection and Interventions Against Rare Pre-existing Drug Resistance MutationsR01HG011356 · NHGRI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI KWONG, LAWRENCE, VEISEH, OMID · 2020 to 2023
$2.7M
A Convergent Node in Melanoma to Block Multiple Oncogenic Pathways SimultaneouslyR01CA251608 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI KWONG, LAWRENCE · 2020 to 2024
$2.5M
NCI NIH HHS R01 CA251608NHGRI NIH HHS R01 HG011356
6 · The paper itself

Abstract

Patients with cholangiocarcinoma have poor clinical outcomes due to late diagnoses, poor prognoses, and limited treatment strategies. To identify drug combinations for this disease, we have conducted a genome-wide CRISPR screen anchored on the bromodomain and extraterminal domain (BET) PROTAC degrader ARV825, from which we identified anticancer synergy when combined with genetic ablation of members of the mTOR pathway. This combination effect was validated using multiple pharmacological BET and mTOR inhibitors, accompanied by increased levels of apoptosis and cell cycle arrest. In a xenograft model, combined BET degradation and mTOR inhibition induced tumor regression. Mechanistically, the 2 inhibitor classes converged on H3K27ac-marked epigenetic suppression of the serine glycine one carbon (SGOC) metabolism pathway, including the key enzymes PHGDH and PSAT1. Knockdown of PSAT1 was sufficient to replicate synergy with single-agent inhibition of either BET or mTOR. Our results tie together epigenetic regulation, metabolism, and apoptosis induction as key therapeutic targets for further exploration in this underserved disease.

Indexed as

CholangiocarcinomaMTOR InhibitorsCell Line, TumorClustered Regularly Interspaced Short Palindromic RepeatsEpigenesis, GeneticHumansTOR Serine-Threonine KinasesMTOR InhibitorsTOR Serine-Threonine KinasesCell BiologyDrug screensGastroenterologyLiver cancer

Identifiers

PMID38060314
PMCPMC10906219
OpenAlexW4389615413

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.