Evidence map›Paper›PMID 38060190›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2024

Systems Biology Approaches to Understanding COVID-19 Spread in the Population.

Sofija Marković, Igor Salom, Marko Djordjevic

Abstract read
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In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Calculating Enzyme Inhibition with Random Forests.Methods in molecular biology (Clifton, N.J.) · 2026
    Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Sofija MarkovićQuantitative Biology Group, Faculty of Biology, University of Belgrade, Belgrade, Serbia.
Igor SalomInstitute of Physics Belgrade, National Institute of the Republic of Serbia, Belgrade, Serbia.
Marko DjordjevicQuantitative Biology Group, Faculty of Biology, University of Belgrade, Belgrade, Serbia. dmarko@bio.bg.ac.rs.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In essence, the COVID-19 pandemic can be regarded as a systems biology problem, with the entire world as the system, and the human population as the element transitioning from one state to another with certain transition rates. While capturing all the relevant features of such a complex system is hardly possible, compartmental epidemiological models can be used as an appropriate simplification to model the system's dynamics and infer its important characteristics, such as basic and effective reproductive numbers of the virus. These measures can later be used as response variables in feature selection methods to uncover the main factors contributing to disease transmissibility. We here demonstrate that a combination of dynamic modeling and machine learning approaches can represent a powerful tool in understanding the spread, not only of COVID-19, but of any infectious disease of epidemiological proportions.

Indexed as

COVID-19VirusesHumansPandemicsSARS-CoV-2Systems BiologyCompartmental epidemiological modelsCOVID-19 transmissibilityEpidemics dynamicsFeature selection methodsMachine learningRegularized regressions

Identifiers

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.