Evidence map›Paper›PMID 38060124›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2024

Optimized Recovery of Viral DNA and RNA from Blood Plasma for Viral Metagenomics.

María Cebriá-Mendoza, Wladimiro Díaz, Rafael Sanjuán, José M Cuevas

Abstract read
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In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

María Cebriá-MendozaInstitute for Integrative Systems Biology (I2SysBio), Universitat de València-CSIC, València, Spain.
Wladimiro DíazInstitute for Integrative Systems Biology (I2SysBio), Universitat de València-CSIC, València, Spain.
Rafael SanjuánInstitute for Integrative Systems Biology (I2SysBio), Universitat de València-CSIC, València, Spain.
José M CuevasInstitute for Integrative Systems Biology (I2SysBio), Universitat de València-CSIC, València, Spain. jose.m.cuevas@uv.es.
Institute for Integrative Systems Biology · ESUniversitat de València · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Metagenomics is vastly improving our ability to discover new viruses, as well as their possible associations with disease. However, metagenomics has also changed our understanding of viruses in general. This is because we can find viruses in healthy hosts in the absence of disease, which changes the perspective of viruses as mere pathogens and offers a new perspective in which viruses function as important components of ecosystems. In concrete, human blood metagenomics has revealed the presence of different types of viruses in apparently healthy subjects. These viruses are human anelloviruses and, to a lower extent, human pegiviruses. Viral metagenomics' major challenge is the correct isolation of the viral nucleic acids from a specific sample. For the protocol to be successful, all steps must be carefully chosen, in particular those that optimize the recovery of viral nucleic acids. Here, we present a procedure that allows the recovery of both DNA and RNA viruses from plasma samples.

Indexed as

DNA, ViralVirusesEcosystemGenome, ViralHigh-Throughput Nucleotide SequencingHumansMetagenomicsPlasmaRNA, ViralDNA, ViralRNA, ViralBlood viromeEmerging virusesHigh throughput sequencingViral metagenomicsVirus discovery

Identifiers

PMID38060124
OpenAlexW4389452215

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.