Evidence map›Paper›PMID 38059127›Full record

ArticleIEEE journal of translational engineering in health and medicine2024

Self-Supervised Learning-Based General Laboratory Progress Pretrained Model for Cardiovascular Event Detection.

Li-Chin Chen, Kuo-Hsuan Hung, Yi-Ju Tseng, Hsin-Yao Wang, Tse-Min Lu, Wei-Chieh Huang, Yu Tsao

Abstract read
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Article in IEEE journal of translational engineering in health and medicine, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Li-Chin ChenResearch Center for Information Technology InnovationAcademia Sinica Taipei 11529 Taiwan.ORCID 0000-0002-2122-1625
Kuo-Hsuan HungResearch Center for Information Technology InnovationAcademia Sinica Taipei 11529 Taiwan.
Yi-Ju TsengDepartment of Computer ScienceNational Yang Ming Chiao Tung University Hsinchu 30010 Taiwan.ORCID 0000-0002-1814-5553
Hsin-Yao WangDepartment of Laboratory MedicineLinkou Chang Gung Memorial Hospital Taoyuan City 33342 Taiwan.
Tse-Min LuDivision of CardiologyDepartment of Internal MedicineTaipei Veterans General Hospital Taipei 112201 Taiwan.
Wei-Chieh HuangDivision of CardiologyDepartment of Internal MedicineTaipei Veterans General Hospital Taipei 112201 Taiwan.ORCID 0000-0003-3759-0131
Yu TsaoResearch Center for Information Technology InnovationAcademia Sinica Taipei 11529 Taiwan.ORCID 0000-0001-6956-0418

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveLeveraging patient data through machine learning techniques in disease care offers a multitude of substantial benefits. Nonetheless, the inherent nature of patient data poses several challenges. Prevalent cases amass substantial longitudinal data owing to their patient volume and consistent follow-ups, however, longitudinal laboratory data are renowned for their irregularity, temporality, absenteeism, and sparsity; In contrast, recruitment for rare or specific cases is often constrained due to their limited patient size and episodic observations. This study employed self-supervised learning (SSL) to pretrain a generalized laboratory progress (GLP) model that captures the overall progression of six common laboratory markers in prevalent cardiovascular cases, with the intention of transferring this knowledge to aid in the detection of specific cardiovascular event. METHODS AND PROCEDURES: GLP implemented a two-stage training approach, leveraging the information embedded within interpolated data and amplify the performance of SSL. After GLP pretraining, it is transferred for target vessel revascularization (TVR) detection.

resultsThe proposed two-stage training improved the performance of pure SSL, and the transferability of GLP exhibited distinctiveness. After GLP processing, the classification exhibited a notable enhancement, with averaged accuracy rising from 0.63 to 0.90. All evaluated metrics demonstrated substantial superiority ([Formula: see text]) compared to prior GLP processing.

conclusionOur study effectively engages in translational engineering by transferring patient progression of cardiovascular laboratory parameters from one patient group to another, transcending the limitations of data availability. The transferability of disease progression optimized the strategies of examinations and treatments, and improves patient prognosis while using commonly available laboratory parameters. The potential for expanding this approach to encompass other diseases holds great promise. CLINICAL IMPACT: Our study effectively transposes patient progression from one cohort to another, surpassing the constraints of episodic observation. The transferability of disease progression contributed to cardiovascular event assessment.

Indexed as

AbsenteeismCardiovascular DiseasesBenchmarkingDisease ProgressionHumansSupervised Machine Learningcardiometabolic diseaseCardiovascular diseasesdisease progressionlaboratory examinationspre-train modelrepresentation learningself-supervised learningtime-series datatransfer learning

Identifiers

PMID38059127
PMCPMC10697297

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.