Evidence map›Paper›PMID 38057766›Full record

ArticleBMC genomics2023

Molecular and functional characterization of chemosensory genes from the root-knot nematode Meloidogyne graminicola.

Tushar K Dutta, Voodikala S Akhil, Manoranjan Dash, Artha Kundu, Victor Phani, Anil Sirohi

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. RSC advances · 2025
    Article
  3. Induced knockdown ofHeliyon · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Tushar K DuttaDivision of Nematology, ICAR-Indian Agricultural Research Institute, New Delhi, 110012, India. tushar.dutta@icar.gov.in.
Voodikala S AkhilDivision of Nematology, ICAR-Indian Agricultural Research Institute, New Delhi, 110012, India.
Manoranjan DashDivision of Nematology, ICAR-Indian Agricultural Research Institute, New Delhi, 110012, India.
Artha KunduDivision of Nematology, ICAR-Indian Agricultural Research Institute, New Delhi, 110012, India.
Victor PhaniDepartment of Agricultural Entomology, College of Agriculture, Uttar Banga Krishi Viswavidyalaya, Balurghat, Dakshin Dinajpur, West Bengal, India.
Anil SirohiDivision of Nematology, ICAR-Indian Agricultural Research Institute, New Delhi, 110012, India.
Indian Agricultural Research Institute · INNorth Bengal Agricultural University · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundRoot-knot nematode Meloidogyne graminicola has emerged as a major threat in rice agroecosystems owing to climate change-induced changes in cultivation practices. Synthetic nematicides are continually being withdrawn from the nematode management toolbox because of their ill effects on the environment. A sustainable strategy would be to develop novel nematicides or resistant plants that would target nematode sensory perception, which is a key step in the host finding biology of plant-parasitic nematodes (PPNs). However, compared to the extensive literature on the free-living nematode Caenorhabditis elegans, negligible research has been performed on PPN chemosensory biology.

resultsThe present study characterizes the five chemosensory genes (Mg-odr-7, Mg-tax-4, Mg-tax-4.1, Mg-osm-9, and Mg-ocr-2) from M. graminicola that are putatively associated with nematode host-finding biology. All the genes were highly transcribed in the early life stages, and RNA interference (RNAi)-induced downregulation of each candidate gene perturbed the normal behavioural phenotypes of M. graminicola, as determined by examining the tracking pattern of juveniles on Pluronic gel medium, attraction to and penetration in rice root tip, and developmental progression in rice root. In addition, a detrimental effect on nematode chemotaxis towards different volatile and nonvolatile organic compounds and host root exudates was documented.

conclusionOur findings enrich the existing literature on PPN chemosensory biology and can supplement future research aimed at identifying a comprehensive chemosensory signal transduction pathway in PPNs.

Indexed as

OryzaTylenchoideaAnimalsCaenorhabditis elegansPlant RootsRNA InterferenceAttractionAversionChemotaxisDsRNAGene expressionPluronic gel

Identifiers

PMID38057766
PMCPMC10698902
OpenAlexW4389392676

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.