Evidence map›Paper›PMID 38057706›Full record

ArticleBMC microbiology2023

Multi-omics analyses of gut microbiota via 16S rRNA gene sequencing, LC-MS/MS and diffusion tension imaging reveal aberrant microbiota-gut-brain axis in very low or extremely low birth weight infants with white matter injury.

Ling Liu, Min Xiang, Xiangsheng Cai, Benqing Wu, Chaohong Chen, Nali Cai, Dang Ao

Open access · goldAbstract read
In one paragraph

Article in BMC microbiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 1 pooled it
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 1 synthesis or guideline pooled it, 18 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Ling Liu *Department of Pediatrics, Affiliated Hospital of Guangdong Medical University, Zhanjiang, 524000, Guangdong, China.
Min Xiang *Department of Orthopedics, Affiliated Hospital of Guangdong Medical University, Zhanjiang, 524001, China.
Xiangsheng CaiGuangzhou Cadre Health Management Center, Guangzhou Eleventh People's Hospital, Guangzhou, 510000, Guangdong, China.
Benqing WuUniversity of the Chinese Academy of Science-Shenzhen Hospital, Shenzhen, 518000, Guangdong, China.
Chaohong ChenDepartment of Pediatrics, Affiliated Hospital of Guangdong Medical University, Zhanjiang, 524000, Guangdong, China.
Nali CaiDepartment of Pediatrics, Affiliated Hospital of Guangdong Medical University, Zhanjiang, 524000, Guangdong, China.
Dang AoDepartment of Pediatrics, Affiliated Hospital of Guangdong Medical University, Zhanjiang, 524000, Guangdong, China. aodang@21cn.com.
Guangdong Medical College · CNChinese University of Hong Kong, Shenzhen · CNTwelfth Guangzhou City People's Hospital · CN

Funding

the Affiliated Hospital of Guangdong Medical University Clinical Research Program LCYJ2019B009 and LCYJ2020DL01Zhanjiang Science and Technology Plan Project 2021A05078
6 · The paper itself

Abstract

objectiveThe goal of this study was to comprehensively investigate the characteristics of gut microbiota dysbiosis and metabolites levels in very low or extremely low birth weight (VLBW/ELBW) infants with white matter injury (WMI).

methodsIn this prospective cohort study, preterm infants with gestational age < 32 weeks and weight < 1.5 kg were investigated. Additionally, fecal samples were collected on days zero, 14d and 28d after admission to the intensive care unit. All subjects underwent brain scan via MRI and DTI at a corrected gestational age of 37 ~ 40 weeks. Based on the results of MRI examination, the VLBW/ELBW infants were divided into two groups: WMI and non-WMI. Finally, based on a multi-omics approach, we performed 16S rRNA gene sequencing, LC-MS/MS, and diffusion tension imaging to identify quantifiable and informative biomarkers for WMI.

resultWe enrolled 23 patients with and 48 patients without WMI. The results of 16S RNA sequencing revealed an increase in the number of Staphylococcus and Acinetobacter species in the fecal samples of infants with WMI, as well as increasing levels of S. caprae and A._johnsonii. LEfSe analysis (LDA ≥ 4) showed that the WMI group carried an abundance of Staphylococcus species including S. caprae, members of the phyla Bacteroidota and Actinobacteriota, and Acinetobacter species. A total of 139 metabolic markers were significantly and differentially expressed between WMI and nWMI. KEGG pathway enrichment analysis revealed that the WMI group showed significant downregulation of 17 metabolic pathways including biosynthesis of arginine and primary bile acids. The WMI group showed delayed brain myelination, especially in the paraventricular white matter and splenium of corpus callosum. Staphylococcus species may affect WMI by downregulating metabolites such as cholic acid, allocholic acid, and 1,3-butadiene. Gut microbiota such as Acinetobacter and Bacteroidetes may alter white matter structurally by upregulating metabolites such as cinobufagin.

conclusionBased on 16S RNA sequencing results, severe gut microbiota dysbiosis was observed in the WMI group. The results might reveal damage to potential signaling pathways of microbiota-gut-brain axis in gut microbiota. The mechanism was mediated via downregulation of the bile acid biosynthetic pathway.

Indexed as

Gastrointestinal MicrobiomeWhite MatterBrain-Gut AxisChromatography, LiquidDysbiosisGenes, rRNAHumansInfantInfant, Extremely Low Birth WeightInfant, NewbornInfant, PrematureMultiomicsProspective StudiesRNA, Ribosomal, 16STandem Mass SpectrometryRNA, Ribosomal, 16SDiffusion tension imagingg_StaphylococcusGut microbiotaMicrobiota-gut-brain axisWhite matter injury

Identifiers

PMID38057706
PMCPMC10699022
OpenAlexW4389395212

What OpenQuestion holds

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LicenceCC BY
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.