Evidence map›Paper›PMID 38057692›Full record

ArticleBrazilian journal of microbiology : [publication of the Brazilian Society for Microbiology]2024

Resistance phenotype and genetic features of a heterogeneous vancomycin intermediate-resistant Staphylococcus aureus strain from an immunocompromised patient.

Xin Cheng, Yaru Wang, Jingxin Ma, Liyan Ma, Wei Sun, Jianrong Su

Open access · greenAbstract read
In one paragraph

Article in Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology], 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed, 1 pooled it
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 1 synthesis or guideline pooled it, 9 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Xin ChengClinical Laboratory Center, Beijing Friendship Hospital, Capital Medical University, Beijing, China.
Yaru WangDepartment of Gynecology and Obstetrics, Huazhong University of Science and Technology Union Shenzhen Hospital, Shenzhen, 518000, China.
Jingxin MaClinical Laboratory Center, Beijing Friendship Hospital, Capital Medical University, Beijing, China.
Liyan MaClinical Laboratory Center, Beijing Friendship Hospital, Capital Medical University, Beijing, China.
Wei SunClinical Laboratory Center, Beijing Friendship Hospital, Capital Medical University, Beijing, China.
Jianrong SuClinical Laboratory Center, Beijing Friendship Hospital, Capital Medical University, Beijing, China. youyi_lab@163.com.ORCID http://orcid.org/0000-0002-1709-6083
Capital Medical University · CNUnion Hospital · CN

Funding

National Key Research and Development Program of China 2021YFC2301004
6 · The paper itself

Abstract

Strain C1 was successfully isolated from an immunosuppressed patient with persistent bacteremia, who had not previously been exposed to glycopeptide antibiotics. This strain was found to be a heterogeneous vancomycin intermediate-resistant Staphylococcus aureus (hVISA). It is noteworthy that, following a brief period of vancomycin treatment, strains C6, C8, and C9, which were obtained from blood and other body parts, exhibited a significant reduction in heterogeneity as determined by population analysis profile-area under the curve (PAP-AUC) detection. Genotyping analysis revealed that these bacterial strains belonged to the same SCCmecIVa-ST59-t437-agrI genotype and shared the same virulome and resistome. In this study, a comparative genomics analysis was conducted between strain C1 and strain N315 to identify potential hVISA-associated mutations. Ultimately, a total of 205 mutation sites in 19 candidate genes, likely associated with the hVISA phenotype, were identified.

Indexed as

Methicillin-Resistant Staphylococcus aureusStaphylococcal InfectionsAnti-Bacterial AgentsHumansImmunocompromised HostMicrobial Sensitivity TestsPhenotypeStaphylococcus aureusVancomycinAnti-Bacterial AgentsVancomycinComparative genomicsGenetic featuresHeterogeneous vancomycin intermediate–resistant Staphylococcus aureusResistance phenotypeSNP

Identifiers

PMID38057692
PMCPMC10920550
OpenAlexW4389408593

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.