Evidence map›Paper›PMID 38057664›Full record

ArticleNature2024

A genomic mutational constraint map using variation in 76,156 human genomes.

Siwei Chen, Laurent C Francioli, Julia K Goodrich, Ryan L Collins, Masahiro Kanai, Qingbo Wang, Jessica Alföldi, Nicholas A Watts, Christopher Vittal, Laura D Gauthier and 37 more

Erratum issuedOpen access · greenAbstract read
In one paragraph

Article in Nature, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 1,145 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
1,145citing papers in PubMed, 1 pooled it
373.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1,145 citing papers in PubMed, 1 synthesis or guideline pooled it, 1,193 citations in OpenAlex.

  1. Guideline
  2. Trial
  3. Integrative multi-omics and bioinformatic analysis ofThe Japanese dental science review · 2026
    Review
  4. Article
  5. Article
  6. Clinical and genetic characterization of intellectual disability.Developmental medicine and child neurology · 2026
    Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review

1,085 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

47 authors at 20 institutions in 24 countries.

Siwei Chen *Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA. siwei@broadinstitute.org.
Laurent C Francioli *Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA.
Julia K GoodrichProgram in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA.
Ryan L CollinsProgram in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA.
Masahiro KanaiProgram in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA.ORCID 0000-0001-5165-4408
Qingbo WangProgram in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA.ORCID 0000-0002-9110-5830
Jessica AlföldiProgram in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA.ORCID 0000-0001-9713-6200
Nicholas A WattsProgram in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA.
Christopher VittalProgram in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA.
Laura D GauthierData Science Platform, Broad Institute of MIT and Harvard, Cambridge, MA, USA.
Timothy PoterbaProgram in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA.
Michael W WilsonProgram in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA.
Yekaterina TarasovaProgram in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA.
William PhuProgram in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA.ORCID 0000-0002-5569-1000
Riley GrantProgram in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA.
Mary T YohannesProgram in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA.
Zan KoenigAnalytic and Translational Genetics Unit, Massachusetts General Hospital, Boston, MA, USA.
Yossi FarjounRichards Lab, Lady Davis Institute, Montreal, Quebec, Canada.ORCID 0000-0002-7002-2868
Eric BanksData Science Platform, Broad Institute of MIT and Harvard, Cambridge, MA, USA.
Stacey DonnellyBroad Institute of MIT and Harvard, Cambridge, MA, USA.
Stacey GabrielBroad Genomics, Broad Institute of MIT and Harvard, Cambridge, MA, USA.
Namrata GuptaProgram in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA.
Steven FerrieraBroad Genomics, Broad Institute of MIT and Harvard, Cambridge, MA, USA.
Charlotte TolonenData Science Platform, Broad Institute of MIT and Harvard, Cambridge, MA, USA.
Sam NovodData Science Platform, Broad Institute of MIT and Harvard, Cambridge, MA, USA.
Louis BergelsonData Science Platform, Broad Institute of MIT and Harvard, Cambridge, MA, USA.
David RoazenData Science Platform, Broad Institute of MIT and Harvard, Cambridge, MA, USA.
Valentin Ruano-RubioData Science Platform, Broad Institute of MIT and Harvard, Cambridge, MA, USA.
Miguel CovarrubiasData Science Platform, Broad Institute of MIT and Harvard, Cambridge, MA, USA.
Christopher LlanwarneData Science Platform, Broad Institute of MIT and Harvard, Cambridge, MA, USA.
Nikelle PetrilloData Science Platform, Broad Institute of MIT and Harvard, Cambridge, MA, USA.
Gordon WadeData Science Platform, Broad Institute of MIT and Harvard, Cambridge, MA, USA.
Thibault JeandetData Science Platform, Broad Institute of MIT and Harvard, Cambridge, MA, USA.
Ruchi MunshiData Science Platform, Broad Institute of MIT and Harvard, Cambridge, MA, USA.
Kathleen TibbettsData Science Platform, Broad Institute of MIT and Harvard, Cambridge, MA, USA.
Genome Aggregation Database Consortium
Anne O'Donnell-LuriaProgram in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA.ORCID 0000-0001-6418-9592
Matthew SolomonsonProgram in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA.
Cotton SeedAnalytic and Translational Genetics Unit, Massachusetts General Hospital, Boston, MA, USA.
Alicia R MartinProgram in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA.ORCID 0000-0003-0241-3522
Michael E TalkowskiProgram in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA.
Heidi L RehmProgram in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA.ORCID 0000-0002-6025-0015
Mark J DalyProgram in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA.ORCID 0000-0002-0949-8752
Grace TiaoProgram in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA.
Benjamin M Neale *Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA.ORCID 0000-0003-1513-6077
Daniel G MacArthur *Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA.
Konrad J KarczewskiProgram in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA. konradk@broadinstitute.org.ORCID 0000-0003-2878-4671
Broad Institute · USUniversity of Helsinki · FIHarvard University · USBrigham and Women's Hospital · USCardiff University · GBFinnish Institute for Health and Welfare · FIHelsinki University Hospital · FIIcahn School of Medicine at Mount Sinai · USInstituto Nacional de Ciencias Médicas y Nutrición Salvador Zubirán · MXUniversity of Eastern Finland · FIBoston University · USChinese University of Hong Kong · HKColumbia University Irving Medical Center · USHebrew University of Jerusalem · ILImperial College Healthcare NHS Trust · GBJohns Hopkins University · USKorea National Institute of Health · KRNational University of Singapore · SGTampere University of Applied Sciences · FIUCLA Medical Center · US

Funding

The Genome Aggregation Database (gnomAD)U24HG011450 · NHGRI · BROAD INSTITUTE, INC. · PI Mark Joseph Daly, Konrad Karczewski · 2021 to 2026
$22.3M
Computational resources for genomic interpretation of type 2 diabetesU54DK105566 · NIDDK · BROAD INSTITUTE, INC. · PI MACARTHUR, DANIEL G, NEALE, BENJAMIN MICHAEL · 2014 to 2017
$8.6M
Clinical Diagnostic Sequencing of Structural VariationR01HD081256 · NICHD · MASSACHUSETTS GENERAL HOSPITAL · PI TALKOWSKI, MICHAEL E · 2015 to 2025
$7.2M
Scalable tool and comprehensive maps to interpret structural variation across the neuropsychiatric spectrumR01MH115957 · NIMH · BROAD INSTITUTE, INC. · PI TALKOWSKI, MICHAEL E · 2019 to 2025
$5.4M
Medical Research Council MC_UP_1102/20NHGRI NIH HHS U24 HG011450NICHD NIH HHS R01 HD081256NIDDK NIH HHS U54 DK105566NIMH NIH HHS R01 MH115957
6 · The paper itself

Abstract

The depletion of disruptive variation caused by purifying natural selection (constraint) has been widely used to investigate protein-coding genes underlying human disorders

Indexed as

Genome, HumanGenomicsModels, GeneticMutationAccess to InformationDatabases, GeneticDatasets as TopicGene FrequencyHumansSelection, Genetic

Identifiers

PMID38057664
PMCPMC11629659
OpenAlexW4389367121

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.