Evidence map›Paper›PMID 38055197›Full record

ArticleChembiochem : a European journal of chemical biology2024

Discovery and Development of Cyclic Peptide Proteasome Stimulators.

Samantha Nelson, Timothy J Harris, Christine S Muli, Marianne E Maresh, Braden Baker, Chloe Smith, Chris Neumann, Darci J Trader, Elizabeth I Parkinson

Open access · bronzeAbstract read
In one paragraph

Article in Chembiochem : a European journal of chemical biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.9field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Samantha NelsonDepartment of Medicinal Chemistry and Molecular Pharmacology, Purdue University, West Lafayette, Indiana, 47906, USA.ORCID 0000-0003-2850-7105
Timothy J HarrisDepartment of Pharmaceutical Sciences, University of California-Irvine, Irvine, California, 92697, USA.
Christine S MuliDepartment of Medicinal Chemistry and Molecular Pharmacology, Purdue University, West Lafayette, Indiana, 47906, USA.
Marianne E MareshDepartment of Medicinal Chemistry and Molecular Pharmacology, Purdue University, West Lafayette, Indiana, 47906, USA.
Braden BakerDepartment of Chemistry, Purdue University, West Lafayette, Indiana, 47906, USA.
Chloe SmithDepartment of Chemistry, Purdue University, West Lafayette, Indiana, 47906, USA.
Chris NeumannDepartment of Chemistry, Purdue University, West Lafayette, Indiana, 47906, USA.
Darci J TraderDepartment of Pharmaceutical Sciences, University of California-Irvine, Irvine, California, 92697, USA.
Elizabeth I ParkinsonDepartment of Medicinal Chemistry and Molecular Pharmacology, Purdue University, West Lafayette, Indiana, 47906, USA.ORCID 0000-0002-3665-5522
Purdue University West Lafayette · USUniversity of California, Irvine · US

Funding

Transgenic Mouse Core Facility Shared Resource (TMCF-SR)P30CA023168 · NCI · PURDUE UNIVERSITY WEST LAFAYETTE · PI Yoon Yeo · 1985 to 2026
$43.4M
Mining Cryptic Biosynthetic Gene Clusters for Novel Bioactive Compounds and BiocatalystsR35GM138002 · NIGMS · PURDUE UNIVERSITY · PI Elizabeth Ivy Parkinson · 2020 to 2026
$2.9M
Monitoring and Manipulating the Activity of the Immunoproteasome with Small MoleculesR01AI150847 · NIAID · UNIVERSITY OF CALIFORNIA-IRVINE · PI TRADER, DARCI J · 2020 to 2023
$1.9M
Investigating the Interaction of a Selective Peptoid Probe and Rpn-13, A Non-Essential Ubiquitin Receptor of the ProteasomeF31CA247327 · NCI · PURDUE UNIVERSITY · PI MULI, CHRISTINE S · 2020 to 2022
$124k
NCI NIH HHS F31 CA247327NCI NIH HHS P30 CA023168NIAID NIH HHS R01 AI150847NIGMS NIH HHS R35 GM138002NIH HHS 1R35GM138002-01NIH HHS F31CA247327NIH HHS R01AI150847
6 · The paper itself

Abstract

The proteasome degrades proteins, which is essential for cellular homeostasis. Ubiquitin independent proteolysis degrades highly disordered and misfolded proteins. A decline of proteasomal activity has been associated with multiple neurodegenerative diseases due to the accumulation of misfolded proteins. In this work, cyclic peptide proteasome stimulators (CyPPSs) that enhance the clearance of misfolded proteins were discovered. In the initial screen of predicted natural products (pNPs), several cyclic peptides were found to stimulate the 20S core particle (20S CP). Development of a robust structural activity relationship led to the identification of potent, cell permeable CyPPSs. In vitro assays revealed that CyPPSs stimulate degradation of highly disordered and misfolded proteins without affecting ordered proteins. Furthermore, using a novel flow-based assay for proteasome activity, several CyPPSs were found to stimulate the 20S CP in cellulo. Overall, this work describes the development of CyPPSs as chemical tools capable of stimulating the proteasome and provides strong support for proteasome stimulation as a therapeutic strategy for neurodegenerative diseases.

Indexed as

Neurodegenerative DiseasesProteasome Endopeptidase ComplexHumansPeptides, CyclicProteinsProteolysisPeptides, CyclicProteasome Endopeptidase ComplexProteinsmacrocyclespeptidesproteasomestimulation

Identifiers

PMID38055197
PMCPMC10993313
OpenAlexW4389397363

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.