Evidence map›Paper›PMID 38054403›Full record

ArticleeLife2023

Modeling apical and basal tree contribution to orientation selectivity in a mouse primary visual cortex layer 2/3 pyramidal cell.

Konstantinos-Evangelos Petousakis, Jiyoung Park, Athanasia Papoutsi, Stelios Smirnakis, Panayiota Poirazi

Open access · goldAbstract read
In one paragraph

Article in eLife, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
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  4. bioRxiv : the preprint server for biology · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Konstantinos-Evangelos Petousakis *Department of Biology, University of Crete, Heraklion, Greece.ORCID 0000-0003-2022-1671
Jiyoung Park *Department of Neurology, Brigham and Women's Hospital and Jamaica Plain Veterans Administration Hospital, Harvard Medical School, Boston, United States.
Athanasia PapoutsiIMBB, FORTH, Heraklion, Greece.ORCID 0000-0003-2466-7259
Stelios SmirnakisDepartment of Neurology, Brigham and Women's Hospital and Jamaica Plain Veterans Administration Hospital, Harvard Medical School, Boston, United States.ORCID 0000-0002-1929-2811
Panayiota PoiraziIMBB, FORTH, Heraklion, Greece.ORCID 0000-0001-6152-595X
FORTH Institute of Molecular Biology and Biotechnology · GRUniversity of Crete · GR

Funding

Population receptive field analysis in subjects with area V1+ lesions.R01EY024019 · NEI · BRIGHAM AND WOMEN'S HOSPITAL · PI SMIRNAKIS, STELIOS MANOLIS · 2014 to 2017
$1.6M
In vivo recruitment of neocortical neurons in stargazer absence seizuresR21NS088457 · NINDS · BAYLOR COLLEGE OF MEDICINE · PI NOEBELS, JEFFREY, SMIRNAKIS, STELIOS MANOLIS · 2015 to 2016
$436k
NEI NIH HHS R01 EY024019NINDS NIH HHS R21 grant NS088457NINDS NIH HHS R21 NS088457
6 · The paper itself

Abstract

Pyramidal neurons, a mainstay of cortical regions, receive a plethora of inputs from various areas onto their morphologically distinct apical and basal trees. Both trees differentially contribute to the somatic response, defining distinct anatomical and possibly functional sub-units. To elucidate the contribution of each tree to the encoding of visual stimuli at the somatic level, we modeled the response pattern of a mouse L2/3 V1 pyramidal neuron to orientation tuned synaptic input. Towards this goal, we used a morphologically detailed computational model of a single cell that replicates electrophysiological and two-photon imaging data. Our simulations predict a synergistic effect of apical and basal trees on somatic action potential generation: basal tree activity, in the form of either depolarization or dendritic spiking, is necessary for producing somatic activity, despite the fact that most somatic spikes are heavily driven by apical dendritic spikes. This model provides evidence for synergistic computations taking place in the basal and apical trees of the L2/3 V1 neuron along with mechanistic explanations for tree-specific contributions and emphasizes the potential role of predictive and attentional feedback input in these cells.

Indexed as

Primary Visual CortexPyramidal CellsAction PotentialsAnimalsDendritesMiceNeuronsapical treebasal treedendritesL 2/3mouseneurosciencepyramidal neuron modelV1

Identifiers

PMID38054403
PMCPMC10754496
OpenAlexW4389397307

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.