Evidence map›Paper›PMID 38052079›Full record

ArticleNeural computation2023

Cocaine Use Prediction With Tensor-Based Machine Learning on Multimodal MRI Connectome Data.

Anru R Zhang, Ryan P Bell, Chen An, Runshi Tang, Shana A Hall, Cliburn Chan, Kareem Al-Khalil, Christina S Meade

Abstract read
In one paragraph

Article in Neural computation, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Mode-wise principal subspace pursuit and matrix spiked covariance model.Journal of the Royal Statistical Society. Series B, Statistical methodology · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Anru R ZhangDepartment of Biostatistics and Bioinformatics and Department of Computer Science, Duke University, Durham, NC 27710, U.S.A. anru.zhang@duke.edu.
Ryan P BellDepartment of Psychiatry and Behavioral Sciences, Duke University, Durham, NC 27710, U.S.A. rpbell@wakehealth.edu.
Chen AnDepartment of Mathematics, Duke University, Durham, NC 27708, U.S.A. chen.an.nku@gmail.com.
Runshi TangDepartment of Statistics, University of Wisconsin-Madison, Madison, WI, U.S.A. rtang56@wisc.edu.
Shana A HallDepartment of Psychiatry and Behavioral Sciences, Duke University, Durham, NC 27710, U.S.A. shana@limbix.com.
Cliburn ChanDepartment of Biostatistics and Bioinformatics, Duke University, Durham, NC 27710, U.S.A. cliburn.chan@duke.edu.
Kareem Al-KhalilDepartment of Psychiatry and Behavioral Sciences, Duke University, Durham, NC 27710, U.S.A. kareem.alkhalil@duke.edu.
Christina S MeadeDepartment of Psychiatry and Behavioral Sciences, Duke University, Durham, NC 27710, U.S.A. cmeade@wakehealth.edu.

Funding

Role of cannabis on HIV-related cognitive impairment: a brain connectomics studyR01DA047149 · NIDA · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI MEADE, CHRISTINA S · 2018 to 2023
$3.1M
Quantitative Methods for HIV/AIDS ResearchR25AI140495 · NIAID · DUKE UNIVERSITY · PI Cliburn C Chan, Gina-Maria Pomann · 2018 to 2026
$2.8M
Decision Making and HIV Risk: New Approaches to neuroAIDS Research in Drug UsersDP2DA040226 · NIDA · DUKE UNIVERSITY · PI MEADE, CHRISTINA S · 2015 to 2015
$2.4M
MRI data fusion to investigate effects of drug abuse on HIV neurological complicationsR01DA045565 · NIDA · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI MEADE, CHRISTINA S · 2018 to 2022
$2.0M
NIAID NIH HHS R25 AI140495NIDA NIH HHS DP2 DA040226NIDA NIH HHS R01 DA045565NIDA NIH HHS R01 DA047149
6 · The paper itself

Abstract

This letter considers the use of machine learning algorithms for predicting cocaine use based on magnetic resonance imaging (MRI) connectomic data. The study used functional MRI (fMRI) and diffusion MRI (dMRI) data collected from 275 individuals, which was then parcellated into 246 regions of interest (ROIs) using the Brainnetome atlas. After data preprocessing, the data sets were transformed into tensor form. We developed a tensor-based unsupervised machine learning algorithm to reduce the size of the data tensor from 275 (individuals) × 2 (fMRI and dMRI) × 246 (ROIs) × 246 (ROIs) to 275 (individuals) × 2 (fMRI and dMRI) × 6 (clusters) × 6 (clusters). This was achieved by applying the high-order Lloyd algorithm to group the ROI data into six clusters. Features were extracted from the reduced tensor and combined with demographic features (age, gender, race, and HIV status). The resulting data set was used to train a Catboost model using subsampling and nested cross-validation techniques, which achieved a prediction accuracy of 0.857 for identifying cocaine users. The model was also compared with other models, and the feature importance of the model was presented. Overall, this study highlights the potential for using tensor-based machine learning algorithms to predict cocaine use based on MRI connectomic data and presents a promising approach for identifying individuals at risk of substance abuse.

Indexed as

CocaineConnectomeHumansMachine LearningMagnetic Resonance ImagingMultimodal ImagingCocaine

Identifiers

PMID38052079
PMCPMC11075092

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.