Evidence map›Paper›PMID 38051303›Full record

ArticleCancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology2024

Genetic Factors and Long-term Treatment-Related Neurocognitive Deficits, Anxiety, and Depression in Childhood Leukemia Survivors: An Exome-Wide Association Study.

Kateryna Petrykey, Sarah Lippé, Serge Sultan, Philippe Robaey, Simon Drouin, Laurence Affret-Bertout, Patrick Beaulieu, Pascal St-Onge, Jessica L Baedke, Yutaka Yasui and 4 more

Open access · greenAbstract read
In one paragraph

Article in Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
1.2field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 2 countries.

Kateryna PetrykeySainte-Justine University Health Center (SJUHC), Montreal, Quebec, Canada.ORCID 0000-0002-5865-3907
Sarah LippéSainte-Justine University Health Center (SJUHC), Montreal, Quebec, Canada.ORCID 0000-0002-4430-1644
Serge SultanSainte-Justine University Health Center (SJUHC), Montreal, Quebec, Canada.ORCID 0000-0002-7520-1734
Philippe RobaeySainte-Justine University Health Center (SJUHC), Montreal, Quebec, Canada.ORCID 0000-0002-4413-4356
Simon DrouinSainte-Justine University Health Center (SJUHC), Montreal, Quebec, Canada.ORCID 0000-0003-1686-544X
Laurence Affret-BertoutSainte-Justine University Health Center (SJUHC), Montreal, Quebec, Canada.ORCID 0000-0003-0120-7882
Patrick BeaulieuSainte-Justine University Health Center (SJUHC), Montreal, Quebec, Canada.ORCID 0009-0001-1034-3627
Pascal St-OngeSainte-Justine University Health Center (SJUHC), Montreal, Quebec, Canada.ORCID 0000-0002-9322-1034
Jessica L BaedkeDepartment of Epidemiology and Cancer Control, St. Jude Children's Research Hospital, Memphis, Tennessee.ORCID 0000-0001-5085-4985
Yutaka YasuiDepartment of Epidemiology and Cancer Control, St. Jude Children's Research Hospital, Memphis, Tennessee.ORCID 0000-0002-7717-8638
Melissa M HudsonDepartment of Epidemiology and Cancer Control, St. Jude Children's Research Hospital, Memphis, Tennessee.ORCID 0000-0001-6984-2407
Caroline LaverdièreSainte-Justine University Health Center (SJUHC), Montreal, Quebec, Canada.ORCID 0000-0002-4917-7152
Daniel SinnettSainte-Justine University Health Center (SJUHC), Montreal, Quebec, Canada.ORCID 0000-0003-3625-6676
Maja KrajinovicSainte-Justine University Health Center (SJUHC), Montreal, Quebec, Canada.ORCID 0000-0003-4772-7031
Centre Hospitalier Universitaire Sainte-Justine · CASt. Jude Children's Research Hospital · USUniversity of Ottawa · CA

Funding

Viral Vector Technology (VVTSR)P30CA021765 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI CHARLES ROBERTS · 1985 to 2026
$166.9M
The St. Jude Lifetime CohortU01CA195547 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI HUDSON, MELISSA M, NESS, KIRSTEN KIMBERLIE · 2015 to 2024
$14.9M
NCI NIH HHS P30 CA021765NCI NIH HHS U01 CA195547
6 · The paper itself

Abstract

backgroundAn increased risk of neurocognitive deficits, anxiety, and depression has been reported in childhood cancer survivors.

methodsWe analyzed associations of neurocognitive deficits, as well as anxiety and depression, with common and rare genetic variants derived from whole-exome sequencing data of acute lymphoblastic leukemia (ALL) survivors from the PETALE cohort. In addition, significant associations were assessed using stratified and multivariable analyses. Next, top-ranking common associations were analyzed in an independent SJLIFE replication cohort of ALL survivors.

resultsSignificant associations were identified in the entire discovery cohort (N = 229) between the AK8 gene and changes in neurocognitive function, whereas PTPRZ1, MUC16, TNRC6C-AS1 were associated with anxiety. Following stratification according to sex, the ZNF382 gene was linked to a neurocognitive deficit in males, whereas APOL2 and C6orf165 were associated with anxiety and EXO5 with depression. Following stratification according to prognostic risk groups, the modulatory effect of rare variants on depression was additionally found in the CYP2W1 and PCMTD1 genes. In the replication SJLIFE cohort (N = 688), the male-specific association in the ZNF382 gene was not significant; however, a P value<0.05 was observed when the entire SJLIFE cohort was analyzed. ZNF382 was significant in males in the combined cohorts as shown by meta-analyses as well as the depression-associated gene EXO5.

conclusionsFurther research is needed to confirm whether the current findings, along with other known risk factors, may be valuable in identifying patients at increased risk of these long-term complications. IMPACT: Our results suggest that specific genes may be related to increased neuropsychological consequences.

Indexed as

DepressionPrecursor Cell Lymphoblastic Leukemia-LymphomaAnxietyExomeHumansMaleReceptor-Like Protein Tyrosine Phosphatases, Class 5SurvivorsPTPRZ1 protein, humanReceptor-Like Protein Tyrosine Phosphatases, Class 5

Identifiers

PMID38051303
PMCPMC10903523
OpenAlexW4389334856

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.