Evidence map›Paper›PMID 38049411›Full record

ArticleNature communications2023

Nitric oxide controls shoot meristem activity via regulation of DNA methylation.

Jian Zeng, Xin'Ai Zhao, Zhe Liang, Inés Hidalgo, Michael Gebert, Pengfei Fan, Christian Wenzl, Sebastian G Gornik, Jan U Lohmann

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
10.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. WUSCHEL Transcription Factor: From Stem Cell Maintenance to Crop Improvement.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Review
  5. Article
  6. Review
  7. Review
  8. The Hidden Architects: Nitric Oxide and Redox Dynamics in Plant Stem Cell Homeostasis.BioEssays : news and reviews in molecular, cellular and developmental biology · 2025
    Review
  9. Article
  10. Article
  11. Article
  12. Research (Washington, D.C.) · 2025
    Article
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 2 countries.

Jian Zeng *Department of Stem Cell Biology, Centre for Organismal Studies, Heidelberg University, 69120, Heidelberg, Germany.
Xin'Ai Zhao *Department of Stem Cell Biology, Centre for Organismal Studies, Heidelberg University, 69120, Heidelberg, Germany.
Zhe LiangDepartment of Stem Cell Biology, Centre for Organismal Studies, Heidelberg University, 69120, Heidelberg, Germany.ORCID 0000-0001-6872-6463
Inés HidalgoDepartment of Stem Cell Biology, Centre for Organismal Studies, Heidelberg University, 69120, Heidelberg, Germany.ORCID 0000-0003-4855-446X
Michael GebertDepartment of Stem Cell Biology, Centre for Organismal Studies, Heidelberg University, 69120, Heidelberg, Germany.ORCID 0000-0003-4169-4152
Pengfei FanDepartment of Stem Cell Biology, Centre for Organismal Studies, Heidelberg University, 69120, Heidelberg, Germany.
Christian WenzlDepartment of Stem Cell Biology, Centre for Organismal Studies, Heidelberg University, 69120, Heidelberg, Germany.
Sebastian G GornikDepartment of Stem Cell Biology, Centre for Organismal Studies, Heidelberg University, 69120, Heidelberg, Germany.
Jan U LohmannDepartment of Stem Cell Biology, Centre for Organismal Studies, Heidelberg University, 69120, Heidelberg, Germany. jan.lohmann@cos.uni-heidelberg.de.ORCID 0000-0003-3667-187X
Heidelberg University · DE

Funding

EC | EU Framework Programme for Research and Innovation H2020 | H2020 Priority Excellent Science | H2020 European Research Council (H2020 Excellent Science - European Research Council) 810296
6 · The paper itself

Abstract

Despite the importance of Nitric Oxide (NO) as signaling molecule in both plant and animal development, the regulatory mechanisms downstream of NO remain largely unclear. Here, we show that NO is involved in Arabidopsis shoot stem cell control via modifying expression and activity of ARGONAUTE 4 (AGO4), a core component of the RNA-directed DNA Methylation (RdDM) pathway. Mutations in components of the RdDM pathway cause meristematic defects, and reduce responses of the stem cell system to NO signaling. Importantly, we find that the stem cell inducing WUSCHEL transcription factor directly interacts with AGO4 in a NO dependent manner, explaining how these two signaling systems may converge to modify DNA methylation patterns. Taken together, our results reveal that NO signaling plays an important role in controlling plant stem cell homeostasis via the regulation of de novo DNA methylation.

Indexed as

ArabidopsisArabidopsis ProteinsDNA MethylationGene Expression Regulation, PlantMeristemNitric OxideRNAArabidopsis ProteinsNitric OxideRNA

Identifiers

PMID38049411
PMCPMC10696095
OpenAlexW4389298262

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.