Evidence map›Paper›PMID 38049376›Full record

ArticleJournal of industrial microbiology & biotechnology2023

Characterization and catalytic investigation of fungal single-module nonribosomal peptide synthetase in terpene-amino acid meroterpenoid biosynthesis.

Cheng-Chung Tseng, Li-Xun Chen, Chi-Fang Lee, Zhijay Tu, Chun-Hung Lin, Hsiao-Ching Lin

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Journal of industrial microbiology & biotechnology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
1.2field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 5 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Cheng-Chung TsengInstitute of Biological Chemistry, Academia Sinica, Taipei 115, Taiwan R.O.C.
Li-Xun ChenInstitute of Biological Chemistry, Academia Sinica, Taipei 115, Taiwan R.O.C.
Chi-Fang LeeInstitute of Biological Chemistry, Academia Sinica, Taipei 115, Taiwan R.O.C.
Zhijay TuInstitute of Biological Chemistry, Academia Sinica, Taipei 115, Taiwan R.O.C.
Chun-Hung LinInstitute of Biological Chemistry, Academia Sinica, Taipei 115, Taiwan R.O.C.
Hsiao-Ching LinInstitute of Biological Chemistry, Academia Sinica, Taipei 115, Taiwan R.O.C.ORCID 0000-0001-8229-314X
National Taiwan University · TWInstitute of Biological Chemistry, Academia Sinica · TW

Funding

Academia Sinica AS-CDA-109-L09Ministry of Science and Technology, Taiwan 111-2113-M-001-045
6 · The paper itself

Abstract

Hybrid natural products are compounds that originate from diverse biosynthetic pathways and undergo a conjugation process, which enables them to expand their chemical diversity and biological functionality. Terpene-amino acid meroterpenoids have garnered increasing attention in recent years, driven by the discovery of noteworthy examples such as the anthelmintic CJ-12662, the insecticidal paeciloxazine, and aculene A (1). In the biosynthesis of terpene-amino acid natural products, single-module nonribosomal peptide synthetases (NRPSs) have been identified to be involved in the esterification step, catalyzing the fusion of modified terpene and amino acid components. Despite prior investigations into these NRPSs through gene deletion or in vivo experiments, the enzymatic basis and mechanistic insights underlying this family of single-module NRPSs remain unclear. In this study, we performed biochemical characterization of AneB by in vitro characterization, molecular docking, and site-directed mutagenesis. The enzyme reaction analyses, performed with L-proline and daucane/nordaucane sesquiterpene substrates, revealed that AneB specifically esterifies the C10-OH of aculenes with L-proline. Notably, in contrast to ThmA in CJ-12662 biosynthesis, which exclusively recognizes oxygenated amorpha-4,11-diene sesquiterpenes for L-tryptophan transfer, AneB demonstrates broad substrate selectivity, including oxygenated amorpha-4,11-diene and 2-phenylethanol, resulting in the production of diverse unnatural prolyl compounds. Furthermore, site-directed mutagenesis experiments indicated the involvement of H794 and D798 in the esterification catalyzed by AneB. Lastly, domain swapping between AneB and ThmA unveiled that the A‒T domains of ThmA can be effectively harnessed by the C domain of AneB for L-tryptophan transfer, thus highlighting the potential of the C domain of AneB for generating various terpene-amino acid meroterpenoid derivatives. ONE-SENTENCE SUMMARY: The enzymatic basis and mechanistic insights into AneB, a single-module NRPS, highlight its capacity to generate various terpene-amino acid meroterpenoid derivatives.

Indexed as

Amino AcidsBiological ProductsCatalysisMolecular Docking SimulationPeptide SynthasesPolycyclic SesquiterpenesProlineTerpenesTryptophanAmino Acidsamorpha-4,11-dieneBiological Productsnon-ribosomal peptide synthasePeptide SynthasesPolycyclic SesquiterpenesProlineTerpenesTryptophanNonribosomal peptide synthetaseSingle-module NRPSTerpene-amino acid meroterpenoids

Identifiers

PMID38049376
PMCPMC10720950
OpenAlexW4389346170

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.