Evidence map›Paper›PMID 38048604›Full record

ArticleRheumatology (Oxford, England)2024

Estimating overdiagnosis in giant cell arteritis diagnostic pathways using genetic data: genetic association study.

Charikleia Chatzigeorgiou, Jennifer H Barrett, Javier Martin, Ann W Morgan, Sarah L Mackie, UK GCA Consortium

Open access · hybridAbstract read
In one paragraph

Article in Rheumatology (Oxford, England), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.6field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Charikleia ChatzigeorgiouSchool of Medicine, University of Leeds, Leeds, UK.ORCID 0000-0003-1471-025X
Jennifer H BarrettSchool of Medicine, University of Leeds, Leeds, UK.
Javier MartinInstitute of Parasitology and Biomedicine Lopez-Neyra, CSIC, Granada, Spain.
Ann W MorganSchool of Medicine, University of Leeds, Leeds, UK.ORCID 0000-0003-1109-624X
Sarah L MackieSchool of Medicine, University of Leeds, Leeds, UK.ORCID 0000-0003-2483-5873
UK GCA Consortium
University of Leeds · GBInstituto de Parasitología y Biomedicina "López - Neyra" · ES

Funding

Academy of Medical SciencesEmma and Leslie ReidLeeds Biomedical Research CentreLeeds BRCMason Medical Research Foundation and Leeds Teaching Hospitals Charitable TrusteesMedical Research Council MR/N011775/1MRC MR/N011775/1National Institute for Health ResearchNIHRNIHR NIHR-CS-012-016University of LeedsWellcome TrustWellcome Trust AMS-SGCL4-Mackie
6 · The paper itself

Abstract

objectivesGCA can be confirmed by temporal artery biopsy (TAB) but false negatives can occur. GCA may be overdiagnosed in TAB-negative cases, or if neither TAB nor imaging is done. We used HLA genetic association of TAB-positive GCA as an 'unbiased umpire' test to estimate historic overdiagnosis of GCA.

methodsPatients diagnosed with GCA between 1990 and 2014 were genotyped. During this era, vascular imaging alone was rarely used to diagnose GCA. HLA region variants were jointly imputed from genome-wide genotypic data of cases and controls. Per-allele frequencies across all HLA variants with P < 1.0 × 10-5 were compared with population control data to estimate overdiagnosis rates in cases without a positive TAB.

resultsGenetic data from 663 GCA patients were compared with data from 2619 population controls. TAB-negative GCA (n = 147) and GCA without TAB result (n = 160) had variant frequencies intermediate between TAB-positive GCA (n = 356) and population controls. For example, the allele frequency of HLA-DRB1*04 was 32% for TAB-positive GCA, 29% for GCA without TAB result, 27% for TAB-negative GCA and 20% in population controls. Making several strong assumptions, we estimated that around two-thirds of TAB-negative cases and one-third of cases without TAB result may have been overdiagnosed. From these data, TAB sensitivity is estimated as 88%.

conclusionsConservatively assuming 95% specificity, TAB has a negative likelihood ratio of around 0.12. Our method for utilizing standard genotyping data as an 'unbiased umpire' might be used as a way of comparing the accuracy of different diagnostic pathways.

Indexed as

Giant Cell ArteritisOverdiagnosisAgedBiopsyCase-Control StudiesFemaleGene FrequencyGenetic Association StudiesGenome-Wide Association StudyGenotypeHumansMaleMiddle AgedTemporal Arteriesgiant cell arteritisHLAoverdiagnosistemporal artery biopsy

Identifiers

PMID38048604
PMCPMC11292050
OpenAlexW4389295877

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.