Evidence map›Paper›PMID 38047694›Full record

ArticleMicrobiology spectrum2024

Targeted amplification-based whole genome sequencing of

S Isabel, A Eshaghi, V R Duvvuri, J B Gubbay, K Cronin, Aimin Li, M Hasso, S T Clark, J P Hopkins, S N Patel and 1 more

Abstract read
In one paragraph

Article in Microbiology spectrum, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Molecular detection and isolation of clade Ib monkeypox virus, Canada, November 2024.Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin · 2025
    Article
  7. Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

S Isabel *Public Health Ontario Laboratory, Public Health Ontario , Toronto, Ontario, Canada.ORCID 0000-0001-7277-4150
A Eshaghi *Public Health Ontario Laboratory, Public Health Ontario , Toronto, Ontario, Canada.ORCID 0000-0001-5150-483X
V R DuvvuriPublic Health Ontario Laboratory, Public Health Ontario , Toronto, Ontario, Canada.
J B GubbayPublic Health Ontario Laboratory, Public Health Ontario , Toronto, Ontario, Canada.ORCID 0000-0003-0026-3786
K CroninPublic Health Ontario Laboratory, Public Health Ontario , Toronto, Ontario, Canada.
Aimin LiPublic Health Ontario Laboratory, Public Health Ontario , Toronto, Ontario, Canada.
M HassoPublic Health Ontario Laboratory, Public Health Ontario , Toronto, Ontario, Canada.
S T ClarkPublic Health Ontario Laboratory, Public Health Ontario , Toronto, Ontario, Canada.
J P HopkinsPublic Health Ontario Laboratory, Public Health Ontario , Toronto, Ontario, Canada.
S N PatelPublic Health Ontario Laboratory, Public Health Ontario , Toronto, Ontario, Canada.
T W A BraukmannPublic Health Ontario Laboratory, Public Health Ontario , Toronto, Ontario, Canada.ORCID 0000-0002-2452-3776

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

importanceWe present a protocol to efficiently sequence genomes of the MPXV-causing mpox. This enables researchers and public health agencies to acquire high-quality genomic data using a rapid and cost-effective approach. Genomic data can be used to conduct surveillance and investigate mpox outbreaks. We present 91 mpox genomes that show the diversity of the 2022 mpox outbreak in Ontario, Canada.

Indexed as

Monkeypox virusMpox, MonkeypoxDisease OutbreaksGenomicsHumansOntarioWhole Genome SequencingMonkeypox virusmpoxtargeted amplificationWGS

Identifiers

PMID38047694
PMCPMC10783113

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.