Evidence map›Paper›PMID 38042814›Full record

ArticleNature communications2023

Targeted mutagenesis of the herpesvirus fusogen central helix captures transition states.

Momei Zhou, Benjamin Vollmer, Emily Machala, Muyuan Chen, Kay Grünewald, Ann M Arvin, Wah Chiu, Stefan L Oliver

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.6field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 12 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Computational design of prefusion-stabilized Herpesvirus gB trimers.bioRxiv : the preprint server for biology · 2024
    Article
  8. Review
  9. Structure-based design of a soluble human cytomegalovirus glycoprotein B antigen stabilized in a prefusion-like conformation.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 2 countries.

Momei ZhouDepartment of Pediatrics, Stanford University School of Medicine, Stanford, CA, USA. mzhou6@stanford.edu.ORCID 0000-0002-9063-6760
Benjamin VollmerCentre for Structural Systems Biology (CSSB), Hamburg, Germany.ORCID 0000-0002-7526-0582
Emily MachalaCentre for Structural Systems Biology (CSSB), Hamburg, Germany.ORCID 0000-0001-8560-5954
Muyuan ChenDivision of Cryo-EM and Bioimaging SSRL, SLAC National Accelerator Laboratory, Menlo Park, CA, 94025, USA.
Kay GrünewaldCentre for Structural Systems Biology (CSSB), Hamburg, Germany.ORCID 0000-0002-4788-2691
Ann M ArvinDepartment of Pediatrics, Stanford University School of Medicine, Stanford, CA, USA.
Wah ChiuDivision of Cryo-EM and Bioimaging SSRL, SLAC National Accelerator Laboratory, Menlo Park, CA, 94025, USA.ORCID 0000-0002-8910-3078
Stefan L OliverDepartment of Pediatrics, Stanford University School of Medicine, Stanford, CA, USA.ORCID 0000-0002-4614-7310
Leibniz Institute of Virology (LIV) · DESLAC National Accelerator Laboratory · USStanford Medicine · USStanford University · USVIR Biotechnology (United States) · US

Funding

Varicella-Zoster Virus: T Cell/Skin Tropisms &ImmunityR01AI020459 · NIAID · STANFORD UNIVERSITY · PI OLIVER, STEFAN LYNE · 1985 to 2023
$6.4M
ChimeraX -- Next Generation Visualization and Analysis Software for Multiscale ModelingR01GM129325 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI FERRIN, THOMAS E · 2018 to 2025
$5.2M
Varicella zoster virus: molecular controls of cell fusion-dependent pathogenesisR01AI102546 · NIAID · STANFORD UNIVERSITY · PI ARVIN, ANN · 2012 to 2016
$1.9M
Four Laser, 18 Color Cell Sorter in the SSFFS10RR025518 · NCRR · STANFORD UNIVERSITY · PI HERZENBERG, LEONARD A · 2009 to 2009
$500k
Determining structure and organization of neurofilaments in situ using cryo-electron tomographyR21MH125285 · NIMH · STANFORD UNIVERSITY · PI CHEN, MUYUAN · 2021 to 2022
$425k
Nikon A1Rsi resonant spectral confocal microscopeS10OD010580 · OD · STANFORD UNIVERSITY · PI FULLER, MARGARET T · 2013 to 2013
$377k
OneView 4kX4k sCMOS camera for transmission electron microscopy applicationsS10OD028536 · OD · STANFORD UNIVERSITY · PI MULHOLLAND, JONATHAN W · 2020 to 2020
$195k
Medical Research Council MR/R017875/1NCRR NIH HHS S10 RR025518NIAID NIH HHS R01 AI020459NIAID NIH HHS R01 AI102546NIGMS NIH HHS R01 GM129325NIH HHS S10 OD010580NIH HHS S10 OD028536NIMH NIH HHS R21 MH125285
6 · The paper itself

Abstract

Herpesviruses remain a burden for animal and human health, including the medically important varicella-zoster virus (VZV). Membrane fusion mediated by conserved core glycoproteins, the fusogen gB and the heterodimer gH-gL, enables herpesvirus cell entry. The ectodomain of gB orthologs has five domains and is proposed to transition from a prefusion to postfusion conformation but the functional relevance of the domains for this transition remains poorly defined. Here we describe structure-function studies of the VZV gB DIII central helix targeting residues

Indexed as

Herpesvirus 1, HumanViral Envelope ProteinsAnimalsHerpesvirus 3, HumanHumansMutagenesisMutationVirus InternalizationViral Envelope Proteins

Identifiers

PMID38042814
PMCPMC10693595
OpenAlexW4389272393

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.