Evidence map›Paper›PMID 38039384›Full record

ArticleGenome biology and evolution2024

Functional Divergence in Solute Permeability between Ray-Finned Fish-Specific Paralogs of aqp10.

Genki Imaizumi, Kazutaka Ushio, Hidenori Nishihara, Ingo Braasch, Erika Watanabe, Shiori Kumagai, Tadaomi Furuta, Koji Matsuzaki, Michael F Romero, Akira Kato and 1 more

Open access · goldAbstract read
In one paragraph

Article in Genome biology and evolution, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.6field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 4 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Genki ImaizumiSchool of Life Science and Technology, Tokyo Institute of Technology, Yokohama, Japan.
Kazutaka UshioSchool of Life Science and Technology, Tokyo Institute of Technology, Yokohama, Japan.ORCID 0000-0002-1263-1948
Hidenori NishiharaSchool of Life Science and Technology, Tokyo Institute of Technology, Yokohama, Japan.ORCID 0000-0002-5843-9994
Ingo BraaschDepartment of Integrative Biology and Ecology, Evolution, and Behavior Program, College of Natural Science, Michigan State University, East Lansing, Michigan, USA.ORCID 0000-0003-4766-611X
Erika WatanabeSchool of Life Science and Technology, Tokyo Institute of Technology, Yokohama, Japan.
Shiori KumagaiSchool of Life Science and Technology, Tokyo Institute of Technology, Yokohama, Japan.
Tadaomi FurutaSchool of Life Science and Technology, Tokyo Institute of Technology, Yokohama, Japan.ORCID 0000-0003-4568-9043
Koji MatsuzakiMarine Science Museum, Fukushima Prefecture (Aquamarine Fukushima, AMF), Iwaki, Japan.ORCID 0000-0002-2583-4293
Michael F RomeroDepartment of Physiology and Biomedical Engineering, Mayo Clinic College of Medicine & Science, Rochester, Minnesota, USA.ORCID 0000-0002-1555-7835
Akira KatoSchool of Life Science and Technology, Tokyo Institute of Technology, Yokohama, Japan.ORCID 0000-0002-9083-1443
Ayumi NagashimaSchool of Life Science and Technology, Tokyo Institute of Technology, Yokohama, Japan.ORCID 0000-0002-0736-0928
Tokyo Institute of Technology · JPFukushima Prefecture History Museum · JPMayo Clinic · USMichigan State University · US

Funding

VISUALIZATION AND PATHOPHYSIOLOGY OF RENAL STONE PRECURSOR LESIONSU54DK100227 · NIDDK · MAYO CLINIC ROCHESTER · PI ROMERO, MICHAEL F. · 2013 to 2017
$6.3M
Drosophila model of oxalate nephrolithiasisR01DK092408 · NIDDK · MAYO CLINIC ROCHESTER · PI DOW, JULIAN ALEXANDER, ROMERO, MICHAEL F. · 2012 to 2015
$837k
NIDDK NIH HHS R01 DK092408NIDDK NIH HHS U54 DK100227NIH HHS DK092408
6 · The paper itself

Abstract

Aquaporin (Aqp) 10 is a member of the aquaglyceroporin subfamily of water channels, and human Aqp10 is permeable to solutes such as glycerol, urea, and boric acid. Tetrapods have a single aqp10 gene, whereas ray-finned fishes have paralogs of this gene through tandem duplication, whole-genome duplication, and subsequent deletion. A previous study on Aqps in the Japanese pufferfish Takifugu rubripes showed that one pufferfish paralog, Aqp10.2b, was permeable to water and glycerol, but not to urea and boric acid. To understand the functional differences of Aqp10s between humans and pufferfish from an evolutionary perspective, we analyzed Aqp10s from an amphibian (Xenopus laevis) and a lobe-finned fish (Protopterus annectens) and Aqp10.1 and Aqp10.2 from several ray-finned fishes (Polypterus senegalus, Lepisosteus oculatus, Danio rerio, and Clupea pallasii). The expression of tetrapod and lobe-finned fish Aqp10s and Aqp10.1-derived Aqps in ray-finned fishes in Xenopus oocytes increased the membrane permeabilities to water, glycerol, urea, and boric acid. In contrast, Aqp10.2-derived Aqps in ray-finned fishes increased water and glycerol permeabilities, whereas those of urea and boric acid were much weaker than those of Aqp10.1-derived Aqps. These results indicate that water, glycerol, urea, and boric acid permeabilities are plesiomorphic activities of Aqp10s and that the ray-finned fish-specific Aqp10.2 paralogs have secondarily reduced or lost urea and boric acid permeability.

Indexed as

AquaporinsGlycerolAnimalsBoric AcidsFishesHumansPhylogenyUreaWaterAquaporinsboric acidBoric AcidsGlycerolUreaWateraquaglyceroporinaquaporin 10neofunctionalizationparalogray-finned fishsubfunctionalization

Identifiers

PMID38039384
PMCPMC10769510
OpenAlexW4389232060

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.