Evidence map›Paper›PMID 38039272›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2023

Bimodular architecture of bacterial effector SAP05 that drives ubiquitin-independent targeted protein degradation.

Qun Liu, Abbas Maqbool, Federico G Mirkin, Yeshveer Singh, Clare E M Stevenson, David M Lawson, Sophien Kamoun, Weijie Huang, Saskia A Hogenhout

Open access · hybridAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 22 citations in OpenAlex.

  1. The pathogenic effector PHYL1The Plant journal : for cell and molecular biology · 2026
    Article
  2. Article
  3. Article
  4. Stripe rust fungus subverts wheat phase separation-mediated immunity to promote infection.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  5. Article
  6. Article
  7. Article
  8. Ubiquitin-Independent Degradation: An Emerging PROTAC Approach?BioEssays : news and reviews in molecular, cellular and developmental biology · 2025
    Review
  9. Review
  10. Article
  11. A phytoplasma effector destabilizes chloroplastic glutamine synthetase inducing chlorotic leaves that attract leafhopper vectors.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Qun Liu *Department of Crop Genetics, John Innes Centre, Norwich Research Park, Norwich NR4 7UH, United Kingdom.ORCID 0000-0002-9979-6090
Abbas Maqbool *Department of Biochemistry and Metabolism, John Innes Centre, Norwich Research Park, Norwich NR4 7UH, United Kingdom.ORCID 0000-0002-6189-5560
Federico G MirkinDepartment of Crop Genetics, John Innes Centre, Norwich Research Park, Norwich NR4 7UH, United Kingdom.ORCID 0000-0002-3323-2348
Yeshveer SinghDepartment of Crop Genetics, John Innes Centre, Norwich Research Park, Norwich NR4 7UH, United Kingdom.ORCID 0000-0003-3406-4531
Clare E M StevensonDepartment of Biochemistry and Metabolism, John Innes Centre, Norwich Research Park, Norwich NR4 7UH, United Kingdom.ORCID 0000-0001-6695-8201
David M LawsonDepartment of Biochemistry and Metabolism, John Innes Centre, Norwich Research Park, Norwich NR4 7UH, United Kingdom.ORCID 0000-0002-7637-4303
Sophien KamounThe Sainsbury Laboratory, University of East Anglia, Norwich NR4 7UH, United Kingdom.ORCID 0000-0002-0290-0315
Weijie HuangNational Key Laboratory of Plant Molecular Genetics, Shanghai Centre for Plant Stress Biology, Centre for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai 20032, China.ORCID 0000-0001-5208-6713
Saskia A HogenhoutDepartment of Crop Genetics, John Innes Centre, Norwich Research Park, Norwich NR4 7UH, United Kingdom.ORCID 0000-0003-1371-5606
John Innes Centre · GBChinese Academy of Sciences · CNUniversity of East Anglia · GB

Funding

Human Frontier Science Program (HFSP) RGP0024/2015STCSM | Natural Science Foundation of Shanghai Municipality () 23ZR1470300UK Research and Innovation (UKRI) EP/X024415/1UKRI | Biotechnology and Biological Sciences Research Council (BBSRC) BBS/E/J/000PR9797
6 · The paper itself

Abstract

In eukaryotes, targeted protein degradation (TPD) typically depends on a series of interactions among ubiquitin ligases that transfer ubiquitin molecules to substrates leading to degradation by the 26S proteasome. We previously identified that the bacterial effector protein SAP05 mediates ubiquitin-independent TPD. SAP05 forms a ternary complex via interactions with the von Willebrand Factor Type A (vWA) domain of the proteasomal ubiquitin receptor Rpn10 and the zinc-finger (ZnF) domains of the SQUAMOSA-PROMOTER BINDING PROTEIN-LIKE (SPL) and GATA BINDING FACTOR (GATA) transcription factors (TFs). This leads to direct TPD of the TFs by the 26S proteasome. Here, we report the crystal structures of the SAP05-Rpn10

Indexed as

Proteasome Endopeptidase ComplexUbiquitinCarrier ProteinsEukaryotaProtein BindingProteolysisCarrier ProteinsProteasome Endopeptidase ComplexUbiquitin26S proteasomebacterial effector proteinphytoplasmatargeted protein degradationubiquitin-independent

Identifiers

PMID38039272
PMCPMC10710061
OpenAlexW4389235805

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.