Evidence map›Paper›PMID 38033116›Full record

ArticlePloS one2023

Development of a novel medium throughput flow-cytometry based micro-neutralisation test for SARS-CoV-2 with applications in clinical vaccine trials and antibody screening.

Sophie O'Reilly, Grace Kenny, Tamara Alrawahneh, Nathan Francois, Lili Gu, Matthew Angeliadis, Valentin de Masson d'Autume, Alejandro Garcia Leon, Eoin R Feeney, Obada Yousif and 5 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.2field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 1 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 1 country.

Sophie O'ReillyCentre for Experimental Pathogen Host Research (CEPHR), University College Dublin, Belfield, Dublin, Ireland.ORCID 0000-0001-5546-7984
Grace KennyCentre for Experimental Pathogen Host Research (CEPHR), University College Dublin, Belfield, Dublin, Ireland.
Tamara AlrawahnehCentre for Experimental Pathogen Host Research (CEPHR), University College Dublin, Belfield, Dublin, Ireland.
Nathan FrancoisCentre for Experimental Pathogen Host Research (CEPHR), University College Dublin, Belfield, Dublin, Ireland.
Lili GuCentre for Experimental Pathogen Host Research (CEPHR), University College Dublin, Belfield, Dublin, Ireland.
Matthew AngeliadisCentre for Experimental Pathogen Host Research (CEPHR), University College Dublin, Belfield, Dublin, Ireland.
Valentin de Masson d'AutumeCentre for Experimental Pathogen Host Research (CEPHR), University College Dublin, Belfield, Dublin, Ireland.
Alejandro Garcia LeonCentre for Experimental Pathogen Host Research (CEPHR), University College Dublin, Belfield, Dublin, Ireland.
Eoin R FeeneyCentre for Experimental Pathogen Host Research (CEPHR), University College Dublin, Belfield, Dublin, Ireland.
Obada YousifEndocrinology Department, Wexford General Hospital, Carricklawn, Wexford, Ireland.
Aoife CotterCentre for Experimental Pathogen Host Research (CEPHR), University College Dublin, Belfield, Dublin, Ireland.
Eoghan de BarraDepartment of Infectious Diseases, Beaumont Hospital, Beaumont, Dublin, Ireland.ORCID 0000-0001-7679-5565
Mary HorganDepartment of Infectious Diseases, Cork University Hospital, Wilton, Cork, Ireland.
Patrick W G MallonCentre for Experimental Pathogen Host Research (CEPHR), University College Dublin, Belfield, Dublin, Ireland.
Virginie GautierCentre for Experimental Pathogen Host Research (CEPHR), University College Dublin, Belfield, Dublin, Ireland.
University College Dublin · IECork University Hospital · IERoyal College of Surgeons in Ireland · IEWexford General Hospital · IE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Quantifying neutralising capacity of circulating SARS-COV-2 antibodies is critical in evaluating protective humoral immune responses generated post-infection/post-vaccination. Here we describe a novel medium-throughput flow cytometry-based micro-neutralisation test to evaluate Neutralising Antibody (NAb) responses against live SARS-CoV-2 Wild Type and Variants of Concern (VOC) in convalescent/vaccinated populations. Flow Cytometry-Based Micro-Neutralisation Test (Micro-NT) was performed in 96-well plates using clinical isolates WT-B, WT-B.1.177.18 and/or VOCs Beta and Omicron. Plasma samples (All Ireland Infectious Diseases (AIID) Cohort) were serially diluted (8 points, half-log) from 1:20 and pre-incubated with SARS-CoV-2 (1h, 37°C). Virus-plasma mixture were added onto Vero E6 or Vero E6/TMPRSS2 cells for 18h. Percentage infected cells was analysed by automated flow cytometry following trypsinisation, fixation and SARS-CoV-2 Nucleoprotein intracellular staining. Half-maximal Neutralisation Titres (NT50) were determined using non-linear regression. Our assay was compared to Plaque Reduction Neutralisation Test (PRNT) and validated against the First WHO International Standard for anti-SARS-CoV-2 immunoglobulin. Both Micro-NT and PRNT achieved comparable NT50 values. Further validation showed adequate correlation with PRNT using a panel of secondary standards of clinical convalescent and vaccinated plasma samples. We found the assay to be reproducible through measuring both repeatability and intermediate precision. Screening 190 convalescent samples and 11 COVID-19 naive controls (AIID cohort) we demonstrated that Micro-NT has broad dynamic range differentiating NT50s <1/20 to >1/5000. We could also characterise immune-escape VOC Beta and Omicron BA.5, achieving fold-reductions in neutralising capacity similar to those published. Our flow cytometry-based Micro-NT is a robust and reliable assay to quantify NAb titres, and has been selected as an endpoint in clinical trials.

Indexed as

COVID-19VaccinesAntibodies, NeutralizingAntibodies, ViralFlow CytometryHumansNeutralization TestsSARS-CoV-2Antibodies, NeutralizingAntibodies, ViralVaccines

Identifiers

PMID38033116
PMCPMC10688860
OpenAlexW4389165229

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.