Evidence map›Paper›PMID 38032088›Full record

ArticleDevelopment (Cambridge, England)2023

Translational control of furina by an RNA regulon is important for left-right patterning, heart morphogenesis and cardiac valve function.

Agnieszka Nagorska, Andreas Zaucker, Finnlay Lambert, Angus Inman, Sara Toral-Perez, Jan Gorodkin, Yue Wan, Michael Smutny, Karuna Sampath

Open access · hybridAbstract read
In one paragraph

Article in Development (Cambridge, England), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact, top 68% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 0 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 3 countries.

Agnieszka NagorskaWarwick Medical School, University of Warwick, Gibbet Hill Road, Coventry CV4 7AL, UK.
Andreas ZauckerWarwick Medical School, University of Warwick, Gibbet Hill Road, Coventry CV4 7AL, UK.
Finnlay LambertWarwick Medical School, University of Warwick, Gibbet Hill Road, Coventry CV4 7AL, UK.
Angus InmanWarwick Medical School, University of Warwick, Gibbet Hill Road, Coventry CV4 7AL, UK.
Sara Toral-PerezWarwick Medical School, University of Warwick, Gibbet Hill Road, Coventry CV4 7AL, UK.ORCID 0000-0003-4309-9891
Jan GorodkinCenter for non-coding RNAs in Technology and Health, Department of Veterinary and Animal Sciences, Faculty for Health and Medical Sciences, University of Copenhagen, Grønnega ̊rdsvej 3, 1870 Frederiksberg C, Denmark.
Yue WanStem Cell and Regenerative Biology, Genome Institute of Singapore, A*STAR, Singapore 138672.
Michael SmutnyWarwick Medical School, University of Warwick, Gibbet Hill Road, Coventry CV4 7AL, UK.
Karuna SampathWarwick Medical School, University of Warwick, Gibbet Hill Road, Coventry CV4 7AL, UK.ORCID 0000-0002-0729-1977
University of Warwick · GBAgency for Science, Technology and Research · SGUniversity of Copenhagen · DK

Funding

Biotechnology and Biological Sciences Research CouncilMedical Research CouncilWellcome Trust
6 · The paper itself

Abstract

Heart development is a complex process that requires asymmetric positioning of the heart, cardiac growth and valve morphogenesis. The mechanisms controlling heart morphogenesis and valve formation are not fully understood. The pro-convertase FurinA functions in heart development across vertebrates. How FurinA activity is regulated during heart development is unknown. Through computational analysis of the zebrafish transcriptome, we identified an RNA motif in a variant FurinA transcript harbouring a long 3' untranslated region (3'UTR). The alternative 3'UTR furina isoform is expressed prior to organ positioning. Somatic deletions in the furina 3'UTR lead to embryonic left-right patterning defects. Reporter localisation and RNA-binding assays show that the furina 3'UTR forms complexes with the conserved RNA-binding translational repressor, Ybx1. Conditional ybx1 mutant embryos show premature and increased Furin reporter expression, abnormal cardiac morphogenesis and looping defects. Mutant ybx1 hearts have an expanded atrioventricular canal, abnormal sino-atrial valves and retrograde blood flow from the ventricle to the atrium. This is similar to observations in humans with heart valve regurgitation. Thus, the furina 3'UTR element/Ybx1 regulon is important for translational repression of FurinA and regulation of heart development.

Indexed as

RegulonZebrafish3' Untranslated RegionsAnimalsHeart ValvesHumansMorphogenesisProprotein ConvertasesZebrafish Proteins3' Untranslated RegionsFurinA protein, zebrafishProprotein ConvertasesZebrafish Proteins3′UTRCardiac morphogenesisCRISPR/Cas editingFurinAHeart developmentLeft-right asymmetryNodal signallingRNA elementTranslational controlValve regurgitationYbx1

Identifiers

PMID38032088
PMCPMC10730018
OpenAlexW4389179850

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.