Evidence map›Paper›PMID 38030664›Full record

ArticleScientific reports2023

Developmental transcriptomic patterns can be altered by transgenic overexpression of Uty.

Kylie D Rock, Lillian M Folts, Hannah C Zierden, Ruth Marx-Rattner, Nicolae Adrian Leu, Bridget M Nugent, Tracy L Bale

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Kylie D RockCenter for Epigenetic Research in Child Health and Brain Development, University of Maryland School of Medicine, Baltimore, USA.
Lillian M FoltsCenter for Epigenetic Research in Child Health and Brain Development, University of Maryland School of Medicine, Baltimore, USA.
Hannah C ZierdenCenter for Epigenetic Research in Child Health and Brain Development, University of Maryland School of Medicine, Baltimore, USA.
Ruth Marx-RattnerCenter for Epigenetic Research in Child Health and Brain Development, University of Maryland School of Medicine, Baltimore, USA.
Nicolae Adrian LeuDepartment of Biomedical Sciences, School of Veterinary Medicine, University of Pennsylvania, Philadelphia, PA, 19104, USA.
Bridget M NugentCenter for Epigenetic Research in Child Health and Brain Development, University of Maryland School of Medicine, Baltimore, USA.
Tracy L BaleCenter for Epigenetic Research in Child Health and Brain Development, University of Maryland School of Medicine, Baltimore, USA. Tracy.Bale@cuanschutz.edu.
University of Maryland, Baltimore · USClemson University · USUniversity of Pennsylvania · US

Funding

Project 3: Isolating food insecurity to understand childhood health outcomes and biological mechanisms of riskP20GM139767 · NIGMS · MIRIAM HOSPITAL · PI KayLoni L. Olson · 2021 to 2026
$14.6M
Statistical Methods for Gene Regulatory Analysis From Single Cell Genomics DataP20GM139769 · NIGMS · CLEMSON UNIVERSITY · PI ANHOLT, ROBERT R. H, MACKAY, TRUDY F. · 2021 to 2025
$10.8M
The role of acetate fermentation in Entamoeba histolytica growth and infectionP20GM109094 · NIGMS · CLEMSON UNIVERSITY · PI MORRIS, MEREDITH T · 2016 to 2020
$10.4M
Paternal stress epigenetic programming of offspring neurodevelopmentR37MH108286 · NIMH · UNIVERSITY OF PENNSYLVANIA · PI BALE, TRACY L · 2015 to 2024
$6.2M
Extracellular vesicles as biomarkers of trauma exposure and PTSD riskR01MH129495 · NIMH · UNIVERSITY OF COLORADO DENVER · PI Tracy L Bale, Tanja Jovanovic · 2022 to 2026
$4.0M
Stress modeling of the human sperm sncRNA transcriptome and causal importance of dynamic miRNA in reproductive and developmental outcomesR01HD105771 · NICHD · UNIVERSITY OF COLORADO DENVER · PI Tracy L Bale, C. Neill EPPERSON · 2022 to 2026
$3.7M
Placental epigenetic mechanisms contributing to sex-specific impacts of maternal stress on fetal developmentR01HD097093 · NICHD · UNIVERSITY OF MARYLAND BALTIMORE · PI BALE, TRACY L · 2019 to 2023
$2.4M
NICHD NIH HHS R01 HD097093NICHD NIH HHS R01 HD105771NIGMS NIH HHS P20 GM109094NIGMS NIH HHS P20 GM139767NIGMS NIH HHS P20 GM139769NIMH NIH HHS R01 MH129495NIMH NIH HHS R37 MH108286
6 · The paper itself

Abstract

The genetic material encoded on X and Y chromosomes provides the foundation by which biological sex differences are established. Epigenetic regulators expressed on these sex chromosomes, including Kdm6a (Utx), Kdm5c, and Ddx3x have far-reaching impacts on transcriptional control of phenotypic sex differences. Although the functionality of UTY (Kdm6c, the Y-linked homologue of UTX), has been supported by more recent studies, its role in developmental sex differences is not understood. Here we test the hypothesis that UTY is an important transcriptional regulator during development that could contribute to sex-specific phenotypes and disease risks across the lifespan. We generated a random insertion Uty transgenic mouse (Uty-Tg) to overexpress Uty. By comparing transcriptomic profiles in developmental tissues, placenta and hypothalamus, we assessed potential UTY functional activity, comparing Uty-expressing female mice (XX + Uty) with wild-type male (XY) and female (XX) mice. To determine if Uty expression altered physiological or behavioral outcomes, adult mice were phenotypically examined. Uty expression masculinized female gene expression patterns in both the placenta and hypothalamus. Gene ontology (GO) and gene set enrichment analysis (GSEA) consistently identified pathways including immune and synaptic signaling as biological processes associated with UTY. Interestingly, adult females expressing Uty gained less weight and had a greater glucose tolerance compared to wild-type male and female mice when provided a high-fat diet. Utilizing a Uty-overexpressing transgenic mouse, our results provide novel evidence as to a functional transcriptional role for UTY in developing tissues, and a foundation to build on its prospective capacity to influence sex-specific developmental and health outcomes.

Indexed as

Gene Expression RegulationTranscriptomeAnimalsFemaleGene Expression ProfilingMaleMiceMice, TransgenicProspective Studies

Identifiers

PMID38030664
PMCPMC10687263
OpenAlexW4389153489

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.