Evidence map›Paper›PMID 38030596›Full record

ArticleNature communications2023

HDAC8-mediated inhibition of EP300 drives a transcriptional state that increases melanoma brain metastasis.

Michael F Emmons, Richard L Bennett, Alberto Riva, Kanchan Gupta, Larissa Anastasio Da Costa Carvalho, Chao Zhang, Robert Macaulay, Daphne Dupéré-Richér, Bin Fang, Edward Seto and 6 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
4.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 29 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 4 institutions in 1 country.

Michael F EmmonsDepartment of Tumor Biology, Moffitt Cancer Center, 12902 Magnolia Drive, Tampa, FL, 33612, USA.
Richard L BennettUF Health Cancer Center, 2033 Mowry Road, University of Florida, Gainesville, FL, 32610, USA.ORCID 0000-0002-0243-2443
Alberto RivaBioinformatics Core, Interdisciplinary Center for Biotechnology Research, University of Florida, 2033 Mowry Road, Gainesville, FL, 32610, USA.ORCID 0000-0001-9150-8333
Kanchan GuptaUF Health Cancer Center, 2033 Mowry Road, University of Florida, Gainesville, FL, 32610, USA.
Larissa Anastasio Da Costa CarvalhoDepartment of Tumor Biology, Moffitt Cancer Center, 12902 Magnolia Drive, Tampa, FL, 33612, USA.ORCID 0000-0001-5720-5910
Chao ZhangDepartment of Tumor Biology, Moffitt Cancer Center, 12902 Magnolia Drive, Tampa, FL, 33612, USA.
Robert MacaulayDepartment of Neuro-Oncology, Moffitt Cancer Center, 12902 Magnolia Drive, Tampa, FL, 33612, USA.ORCID 0000-0003-1115-3654
Daphne Dupéré-RichérUF Health Cancer Center, 2033 Mowry Road, University of Florida, Gainesville, FL, 32610, USA.
Bin FangProteomics & Metabolomics Core, Moffitt Cancer Center, 12902 Magnolia Drive, Tampa, FL, 33612, USA.ORCID 0000-0002-7636-1318
Edward SetoDepartment of Biochemistry & Molecular Medicine, School of Medicine & Health Sciences, George Washington Cancer Center, George Washington University, 2300 Eye Street, Washington, DC, 20037, USA.
John M KoomenDepartment of Molecular Oncology, Moffitt Cancer Center, 12902 Magnolia Drive, Tampa, FL, 33612, USA.ORCID 0000-0002-3818-1762
Jiannong LiDepartment of Bioinformatics and Biostatistics, Moffitt Cancer Center, 12902 Magnolia Drive, Tampa, FL, 33612, USA.
Y Ann ChenDepartment of Bioinformatics and Biostatistics, Moffitt Cancer Center, 12902 Magnolia Drive, Tampa, FL, 33612, USA.ORCID 0000-0003-1468-3490
Peter A ForsythDepartment of Neuro-Oncology, Moffitt Cancer Center, 12902 Magnolia Drive, Tampa, FL, 33612, USA.ORCID 0000-0002-3756-8594
Jonathan D LichtUF Health Cancer Center, 2033 Mowry Road, University of Florida, Gainesville, FL, 32610, USA.ORCID 0000-0002-3942-1369
Keiran S M SmalleyDepartment of Tumor Biology, Moffitt Cancer Center, 12902 Magnolia Drive, Tampa, FL, 33612, USA. keiran.smalley@moffitt.org.ORCID 0000-0003-1089-9307
Moffitt Cancer Center · USUniversity of Florida Health · USGeorge Washington University · USUniversity of Florida · US

Funding

TRANSLATIONAL RESEARCHP30CA076292 · NCI · UNIVERSITY OF SOUTH FLORIDA · PI John L. Cleveland · 1998 to 2026
$93.5M
University of Florida Health Cancer Center Support GrantP30CA247796 · NCI · UNIVERSITY OF FLORIDA · PI Alison Ivey · 2023 to 2026
$10.9M
Defining and targeting epigenetic plasticity-driven drug resistance and immune escape in melanomaR01CA262483 · NCI · H. LEE MOFFITT CANCER CTR & RES INST · PI Jonathan D. Licht, Keiran Smalley · 2022 to 2026
$2.4M
Defining and targeting the epigenetic programs involved in melanoma developmentR21CA267141 · NCI · H. LEE MOFFITT CANCER CTR & RES INST · PI SMALLEY, KEIRAN · 2022 to 2023
$429k
NCI NIH HHS P30 CA076292NCI NIH HHS P30 CA247796NCI NIH HHS R01 CA262483NCI NIH HHS R21 CA267141
6 · The paper itself

Abstract

Melanomas can adopt multiple transcriptional states. Little is known about the epigenetic drivers of these cell states, limiting our ability to regulate melanoma heterogeneity. Here, we identify stress-induced HDAC8 activity as driving melanoma brain metastasis development. Exposure of melanocytes and melanoma cells to multiple stresses increases HDAC8 activation leading to a neural crest-stem cell transcriptional state and an amoeboid, invasive phenotype that increases seeding to the brain. Using ATAC-Seq and ChIP-Seq we show that increased HDAC8 activity alters chromatin structure by increasing H3K27ac and enhancing accessibility at c-Jun binding sites. Functionally, HDAC8 deacetylates the histone acetyltransferase EP300, causing its enzymatic inactivation. This, in turn, increases binding of EP300 to Jun-transcriptional sites and decreases binding to MITF-transcriptional sites. Inhibition of EP300 increases melanoma cell invasion, resistance to stress and increases melanoma brain metastasis development. HDAC8 is identified as a mediator of transcriptional co-factor inactivation and chromatin accessibility that drives brain metastasis.

Indexed as

Brain NeoplasmsE1A-Associated p300 ProteinHistone DeacetylasesMelanomaChromatinHumansMelanocytesRepressor ProteinsTranscription FactorsChromatinE1A-Associated p300 ProteinEP300 protein, humanHDAC8 protein, humanHistone DeacetylasesRepressor ProteinsTranscription Factors

Identifiers

PMID38030596
PMCPMC10686983
OpenAlexW4389142750

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.