Evidence map›Paper›PMID 38029972›Full record

ArticleJournal of neuroscience methods2024

A novel naïve Bayes approach to identifying grooming behaviors in the force-plate actometric platform.

Collin J Anderson, Roberto Cadeddu, Daria Nesterovich Anderson, Job A Huxford, Easton R VanLuik, Karen Odeh, Christopher Pittenger, Stefan M Pulst, Marco Bortolato

Abstract read
In one paragraph

Article in Journal of neuroscience methods, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors.

Collin J AndersonSchool of Medical Sciences, University of Sydney, Camperdown, Australia; School of Biomedical Engineering, University of Sydney, Camperdown, Australia; Department of Neurology, School of Medicine, University of Utah, Salt Lake City, UT, USA. Electronic address: collin.anderson@sydney.edu.au.
Roberto CadedduDepartment of Pharmacology and Toxicology, College of Pharmacy, University of Utah, Salt Lake City, UT, USA.
Daria Nesterovich AndersonSchool of Biomedical Engineering, University of Sydney, Camperdown, Australia; Department of Pharmacology and Toxicology, College of Pharmacy, University of Utah, Salt Lake City, UT, USA; Department of Neurosurgery, School of Medicine, University of Utah, Salt Lake City, UT, USA.
Job A HuxfordDepartment of Pharmacology and Toxicology, College of Pharmacy, University of Utah, Salt Lake City, UT, USA.
Easton R VanLuikDepartment of Pharmacology and Toxicology, College of Pharmacy, University of Utah, Salt Lake City, UT, USA.
Karen OdehDepartment of Pharmacology and Toxicology, College of Pharmacy, University of Utah, Salt Lake City, UT, USA.
Christopher PittengerDepartment of Psychiatry, School of Medicine, Yale University, New Haven, CT, USA; Department of Psychology, School of Arts and Sciences, Yale University, New Haven, CT, USA; Child Study Center, School of Medicine, Yale University, New Haven, CT, USA; Center for Brain and Mind Health, School of Medicine, Yale University, New Haven, CT, USA.
Stefan M PulstDepartment of Neurology, School of Medicine, University of Utah, Salt Lake City, UT, USA.
Marco BortolatoDepartment of Pharmacology and Toxicology, College of Pharmacy, University of Utah, Salt Lake City, UT, USA. Electronic address: marco.bortolato@utah.edu.

Funding

Ataxin-2 complex proteins in neurodegeneration.R35NS127253 · NINDS · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI Stefan M. PULST · 2022 to 2026
$4.6M
Exploring the role of neurosteroids in tic modulationR21NS108722 · NINDS · UNIVERSITY OF UTAH · PI BORTOLATO, MARCO, PITTENGER, CHRISTOPHER JOHN · 2018 to 2019
$428k
NINDS NIH HHS R21 NS108722NINDS NIH HHS R35 NS127253
6 · The paper itself

Abstract

backgroundSelf-grooming behavior in rodents serves as a valuable behavioral index for investigating stereotyped and perseverative responses. Most current grooming analyses rely on video observation, which lacks standardization, efficiency, and quantitative information about force. To address these limitations, we developed an automated paradigm to analyze grooming using a force-plate actometer. NEW

methodGrooming behavior is quantified by calculating ratios of relevant movement power spectral bands. These ratios are input into a naïve Bayes classifier, trained with manual video observations. The effectiveness of this method was tested using CIN-d mice, an animal model developed through early-life depletion of striatal cholinergic interneurons (CIN-d) and featuring prolonged grooming responses to acute stressors. Behavioral monitoring was simultaneously conducted on the force-place actometer and by video recording.

resultsThe naïve Bayes approach achieved 93.7% accurate classification and an area under the receiver operating characteristic curve of 0.894. We confirmed that male CIN-d mice displayed significantly longer grooming durations than controls. However, this elevation was not correlated with increases in grooming force. Notably, the dopaminergic antagonist haloperidol reduced grooming force and duration. COMPARISON WITH EXISTING

methodsIn contrast to observation-based approaches, our method affords rapid, unbiased, and automated assessment of grooming duration, frequency, and force.

conclusionsOur novel approach enables fast and accurate automated detection of grooming behaviors. This method holds promise for high-throughput assessments of grooming stereotypies in animal models of neuropsychiatric disorders.

Indexed as

Behavior, AnimalMovementAnimalsBayes TheoremGroomingHaloperidolMaleMiceRodentiaHaloperidolAnimal modelsForce-plate actometerGroomingNaïve Bayes classifier

Identifiers

PMID38029972
PMCPMC13403341

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.