Evidence map›Paper›PMID 38024534›Full record

ArticleDrug design, development and therapy2023

Integrated Network Pharmacology, Molecular Docking and Animal Experiment to Explore the Efficacy and Potential Mechanism of Baiyu Decoction Against Ulcerative Colitis by Enema.

Yuan Cui, Jingyi Hu, Yanan Li, Ryan Au, Yulai Fang, Cheng Cheng, Feng Xu, Weiyang Li, Yuguang Wu, Lei Zhu and 1 more

Open access · goldAbstract read
In one paragraph

Article in Drug design, development and therapy, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Yuan CuiNanjing University of Chinese Medicine, Nanjing, People's Republic of China.
Jingyi HuAffiliated Hospital of Nanjing University of Chinese Medicine, Nanjing, People's Republic of China.
Yanan LiNanjing University of Chinese Medicine, Nanjing, People's Republic of China.
Ryan AuNanjing University of Chinese Medicine, Nanjing, People's Republic of China.
Yulai FangAffiliated Hospital of Nanjing University of Chinese Medicine, Nanjing, People's Republic of China.
Cheng ChengNanjing University of Chinese Medicine, Nanjing, People's Republic of China.
Feng XuNanjing University of Chinese Medicine, Nanjing, People's Republic of China.
Weiyang LiNanjing University of Chinese Medicine, Nanjing, People's Republic of China.
Yuguang WuNanjing University of Chinese Medicine, Nanjing, People's Republic of China.
Lei ZhuAffiliated Hospital of Nanjing University of Chinese Medicine, Nanjing, People's Republic of China.
Hong ShenAffiliated Hospital of Nanjing University of Chinese Medicine, Nanjing, People's Republic of China.
Nanjing University of Chinese Medicine · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Baiyu Decoction (BYD), a clinical prescription of traditional Chinese medicine, has been proven to be valuable for treating ulcerative colitis (UC) by enema. However, the mechanism of BYD against UC remains unclear. Purpose: A combination of bioinformatics methods including network pharmacology and molecular docking and animal experiments were utilized to investigate the potential mechanism of BYD in the treatment of UC. Materials and Methods: Firstly, the representative compounds of each herb in BYD were detected by liquid chromatography-mass spectrometry. Subsequently, we predicted the core targets and potential pathways of BYD for treating UC through network pharmacology. And rat colitis model was established with dextran sodium sulfate. UC rats were subjected to BYD enema administration, during which we recorded body weight changes, disease activity index, and colon length to assess the effectiveness of BYD. Besides, quantitative real-time PCR, western blotting, ELISA and immunofluorescence were used to detect intestinal inflammatory factors, intestinal barrier biomarkers and TOLL-like receptor pathway in rats. Finally, the core components and targets of BYD were subjected to molecular docking so as to further validate the results of network pharmacology. Results: A total of 41 active compositions and 203 targets related to BYD-UC were subjected to screening. The results of bioinformatics analysis showed that quercetin and kaempferol may be the main compounds. Additionally, AKT1, IL-6, TP53, TNF and IL-1β were regarded as potential therapeutic targets. KEGG results explained that TOLL-like receptor pathway might play a pivotal role in BYD protecting against UC. In addition, animal experiments and molecular docking validated the network pharmacology results. BYD enema treatment can reduce body weight loss, lower disease activity index score, reverse colon shortening, relieve intestinal inflammation, protect intestinal barrier, and inhibit TOLL-like receptor pathway in UC rats. Besides, molecular docking suggested that quercetin and kaempferol docked well with TLR4, AKT1, IL-6, TP53. Conclusion: Utilizing network pharmacology, animal studies, and molecular docking, enema therapy with BYD was confirmed to have anti-UC efficacy by alleviating intestinal inflammation, protecting the intestinal barrier, and inhibiting the TOLL-like receptor pathway. Researchers should focus not only on oral medications but also on the rectal administration of medications in furtherance of the cure of ulcerative colitis.

Indexed as

Animal ExperimentationColitis, UlcerativeDrugs, Chinese HerbalAnimalsDextran SulfateDisease Models, AnimalEnemaInflammationInterleukin-6KaempferolsMolecular Docking SimulationNetwork PharmacologyQuercetinRatsToll-Like ReceptorsDextran SulfateDrugs, Chinese HerbalInterleukin-6KaempferolsQuercetinToll-Like Receptorsenema therapynetwork pharmacologyTLR4/MyD88/NF-κB pathwayulcerative colitis

Identifiers

PMID38024534
PMCPMC10680469
OpenAlexW4388914773

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.