Evidence map›Paper›PMID 38021355›Full record

ArticleTranslational gastroenterology and hepatology2023

Analysis of prognostic germline polymorphisms in patients with advanced hepatocellular carcinoma.

Michael Herman, Benjamin H Lok, Steven Gallinger, Laura Dawson, Raymond Kim, Dangxiao Cheng, Tara Paton, Roxana Bucur, Devalben Patel, Rouhi Fazelzad and 2 more

Open access · diamondAbstract read
In one paragraph

Article in Translational gastroenterology and hepatology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.4field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 2 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Michael HermanDepartment of Oncology, Oakville Trafalgar Memorial Hospital, Ontario, Canada.
Benjamin H LokDepartment of Oncology, University Health Network, Toronto, Canada.
Steven GallingerDepartment of Oncology, University Health Network, Toronto, Canada.
Laura DawsonDepartment of Oncology, University Health Network, Toronto, Canada.
Raymond KimDepartment of Oncology, University Health Network, Toronto, Canada.
Dangxiao ChengDepartment of Oncology, University Health Network, Toronto, Canada.
Tara PatonDepartment of Applied Genomics, The Hospital for Sick Children, Toronto, Canada.
Roxana BucurDepartment of Oncology, University Health Network, Toronto, Canada.
Devalben PatelDepartment of Oncology, University Health Network, Toronto, Canada.
Rouhi FazelzadDepartment of Oncology, University Health Network, Toronto, Canada.
Katrina HuenikenDepartment of Oncology, University Health Network, Toronto, Canada.
Geoffrey LiuDepartment of Oncology, University Health Network, Toronto, Canada.
University Health Network · CAHospital for Sick Children · CAOakville-Trafalgar Memorial Hospital · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: The prognosis of hepatocellular carcinoma (HCC) is influenced by both tumor and patient specific factors. Current therapies of advanced HCC target angiogenesis and immune evasion, however there are no clinically useful biomarkers to guide clinicians. Methods: Our aim in this retrospective cohort study was to validate single nucleotide polymorphisms (SNPs) prognostic of outcome in advanced HCC from the literature, and to analyze exploratory SNPs chosen from evaluation of the HCC tumor immune microenvironment. Using a database of patients with HCC treated with sorafenib, blood samples were genotyped, clinical variables were retrospectively collected, and SNPs were analyzed for association with progression-free survival (PFS) and overall survival (OS). A subsequent analysis was conducted to determine if identified SNPs were prognostic in trans arterial chemoembolization (TACE) treated patients. Results: Literature review identified 7 SNPs in vascular endothelial growth factor (VEGF), eNOS, angiopoietin 2 (ANGPT2) and vascular endothelial growth factor receptor 2 (VEGFR2), however none were externally validated in our dataset. Of the 35 exploratory immunomodulatory SNPs, the following were associated with PFS or OS: CCL2 C-C motif ligand 2 (CCL2) (rs1024611), interleukin-10 ( Conclusions: SNPs identified by literature review to be prognostic in sorafenib treated patients with advanced HCC were not validated in our dataset. Our findings suggest potentially important prognostic implications of SNPs in VEGFR2, CCL2, IL-10, CTLA-4 and NFKB1 that deserve further study.

Indexed as

biomarkersHepatocellular carcinoma (HCC)prognosissingle nucleotide polymorphisms (SNPs)sorafenib

Identifiers

PMID38021355
PMCPMC10643180
OpenAlexW4388185433

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.