Evidence map›Paper›PMID 38021167›Full record

ArticlemicroPublication biology2023

A Novel Application of Spinning Disk Technology to Collect Plasma from Whole Blood Prior to Quantifying Plasma RNA.

Naomi Rapier-Sharman, Mae-Lynn L Hutchinson, Carlos M Moreno, Abraham Quaye, Brian D Poole, K Scott Weber, William G Pitt, Brett E Pickett

Abstract read
In one paragraph

Article in microPublication biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Naomi Rapier-Sharman *Department of Microbiology and Molecular Biology, Brigham Young University, Provo, Utah, United States.
Mae-Lynn L Hutchinson *Department of Chemical Engineering, Brigham Young University, Provo, Utah, United States.
Carlos M MorenoDepartment of Microbiology and Molecular Biology, Brigham Young University, Provo, Utah, United States.
Abraham QuayeDepartment of Microbiology and Molecular Biology, Brigham Young University, Provo, Utah, United States.
Brian D PooleDepartment of Microbiology and Molecular Biology, Brigham Young University, Provo, Utah, United States.
K Scott WeberDepartment of Microbiology and Molecular Biology, Brigham Young University, Provo, Utah, United States.
William G PittDepartment of Chemical Engineering, Brigham Young University, Provo, Utah, United States.
Brett E PickettDepartment of Microbiology and Molecular Biology, Brigham Young University, Provo, Utah, United States.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The spinning disk technology has previously been utilized to isolate bacterial components from blood in hours instead of days. We hypothesized that this platform could be applied as an alternative approach to isolating plasma RNA from a whole blood sample. We consequently tested the efficacy of the spinning disk technology to extract plasma from whole blood upstream of RNA isolation and analysis. To do so, we collected plasma using either the spinning disk or the typical two-spin centrifuge method. We found that the spinning disk method results in significantly more hemolysis during collection than the conventional two-spin centrifuge method. However, when plasma RNA recovered from both collection methods was quantified using quantitative Real-Time Polymerase Chain Reaction (qRT-PCR), we found that the spinning disk method yielded a higher plasma RNA concentration than the two-spin centrifuge method. This suggests that the spinning disk may be an efficient alternative method to recover plasma RNA. Further work is needed to determine whether red blood cell RNA contamination is present in the plasma RNA extracted from spinning disk-processed plasma.

Identifiers

PMID38021167
PMCPMC10656623

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.