Evidence map›Paper›PMID 38020968›Full record

ArticleCell genomics2023

Dissecting aneuploidy phenotypes by constructing Sc2.0 chromosome VII and SCRaMbLEing synthetic disomic yeast.

Yue Shen, Feng Gao, Yun Wang, Yuerong Wang, Ju Zheng, Jianhui Gong, Jintao Zhang, Zhouqing Luo, Daniel Schindler, Yang Deng and 21 more

Open access · goldAbstract read
In one paragraph

Article in Cell genomics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
12.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 32 citations in OpenAlex.

  1. Review
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  4. Review
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  7. The design and engineering of synthetic genomes.Nature reviews. Genetics · 2025
    Review
  8. Recent technology advancements in large-scale DNA assembly.Quantitative biology (Beijing, China) · 2025
    Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Synthetic genomes unveil the effects of synonymous recoding.bioRxiv : the preprint server for biology · 2024
    Article
  14. Article
  15. Article
  16. Article
  17. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

31 authors at 5 institutions in 5 countries.

Yue ShenBGI Research, Shenzhen 518083, China.
Feng GaoBGI Research, Shenzhen 518083, China.
Yun WangBGI Research, Shenzhen 518083, China.
Yuerong WangBGI Research, Shenzhen 518083, China.
Ju ZhengBGI Research, Shenzhen 518083, China.
Jianhui GongBGI Research, Shenzhen 518083, China.
Jintao ZhangBGI Research, Shenzhen 518083, China.
Zhouqing LuoGuangdong Provincial Key Laboratory of Synthetic Genomics, Shenzhen Key Laboratory of Synthetic Genomics, Center for Synthetic Genomics, Shenzhen Institute of Synthetic Biology, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China.
Daniel SchindlerManchester Institute of Biotechnology, University of Manchester, 131 Princess Street, Manchester M1 7DN, UK.
Yang DengBGI Research, Shenzhen 518083, China.
Weichao DingBGI Research, Shenzhen 518083, China.
Tao LinBGI Research, Shenzhen 518083, China.
Reem SwidahManchester Institute of Biotechnology, University of Manchester, 131 Princess Street, Manchester M1 7DN, UK.
Hongcui ZhaoBGI Research, Shenzhen 518083, China.
Shuangying JiangGuangdong Provincial Key Laboratory of Synthetic Genomics, Shenzhen Key Laboratory of Synthetic Genomics, Center for Synthetic Genomics, Shenzhen Institute of Synthetic Biology, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China.
Cheng ZengGuangdong Provincial Key Laboratory of Synthetic Genomics, Shenzhen Key Laboratory of Synthetic Genomics, Center for Synthetic Genomics, Shenzhen Institute of Synthetic Biology, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China.
Shihong ChenBGI Research, Shenzhen 518083, China.
Tai ChenBGI Research, Shenzhen 518083, China.
Yong WangBGI Research, Shenzhen 518083, China.
Yisha LuoManchester Institute of Biotechnology, University of Manchester, 131 Princess Street, Manchester M1 7DN, UK.
Leslie MitchellInstitute for Systems Genetics and Department of Biochemistry and Molecular Pharmacology, NYU Langone Health, New York, NY 10016, USA.
Joel S BaderDepartment of Biomedical Engineering, Johns Hopkins University, Baltimore, MD, USA.
Guojie ZhangUniversity of Copenhagen, Universitetsparken 15, 2100 Copenhagen, Denmark.
Xia ShenGreater Bay Area Institute of Precision Medicine (Guangzhou), Fudan University, Guangzhou, China.
Jian WangBGI Research, Shenzhen 518083, China.
Xian FuBGI Research, Shenzhen 518083, China.
Junbiao DaiGuangdong Provincial Key Laboratory of Synthetic Genomics, Shenzhen Key Laboratory of Synthetic Genomics, Center for Synthetic Genomics, Shenzhen Institute of Synthetic Biology, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China.
Jef D BoekeInstitute for Systems Genetics and Department of Biochemistry and Molecular Pharmacology, NYU Langone Health, New York, NY 10016, USA.
Huanming YangBGI Research, Shenzhen 518083, China.
Xun XuBGI Research, Shenzhen 518083, China.
Yizhi CaiManchester Institute of Biotechnology, University of Manchester, 131 Princess Street, Manchester M1 7DN, UK.
BGI Group (China) · CNShenzhen University · CNUniversity of Manchester · GBInstitute for Systems Biology · USJohns Hopkins University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Aneuploidy compromises genomic stability, often leading to embryo inviability, and is frequently associated with tumorigenesis and aging. Different aneuploid chromosome stoichiometries lead to distinct transcriptomic and phenotypic changes, making it helpful to study aneuploidy in tightly controlled genetic backgrounds. By deploying the engineered SCRaMbLE (synthetic chromosome rearrangement and modification by loxP-mediated evolution) system to the newly synthesized megabase Sc2.0 chromosome VII (

Indexed as

aneuploidy phenotypesaneuploidy recovery approachesgrowth rateSCRaMbLEsynthetic disomic yeastsynthetic genomicssynVII

Identifiers

PMID38020968
PMCPMC10667312
OpenAlexW4388522980

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.