Evidence map›Paper›PMID 38020067›Full record

ArticleFunction (Oxford, England)2024

Coordinated Regulation of Myonuclear DNA Methylation, mRNA, and miRNA Levels Associates With the Metabolic Response to Rapid Synergist Ablation-Induced Skeletal Muscle Hypertrophy in Female Mice.

Ahmed Ismaeel, Nicholas T Thomas, Mariah McCashland, Ivan J Vechetti, Sebastian Edman, Johanna T Lanner, Vandré C Figueiredo, Christopher S Fry, John J McCarthy, Yuan Wen and 2 more

Open access · goldAbstract read
In one paragraph

Article in Function (Oxford, England), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed, 1 pooled it
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 1 synthesis or guideline pooled it, 22 citations in OpenAlex.

  1. Pooled it
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  12. Skeletal muscle hypertrophy: cell growth is cell growth.American journal of physiology. Cell physiology · 2024
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 2 countries.

Ahmed IsmaeelDepartment of Physiology, College of Medicine, University of Kentucky, Lexington, KY 40508, USA.ORCID 0000-0003-4025-3945
Nicholas T ThomasCenter for Muscle Biology, University of Kentucky, Lexington, KY 40536, USA.
Mariah McCashlandDepartment of Nutrition and Health Sciences, University of Nebraska-Lincoln, Lincoln, NE 68583, USA.
Ivan J VechettiDepartment of Nutrition and Health Sciences, University of Nebraska-Lincoln, Lincoln, NE 68583, USA.
Sebastian EdmanDepartment of Women's and Children's Health, Karolinska Institutet, Solna 17177, Sweden.
Johanna T LannerDepartment of Physiology and Pharmacology, Karolinska Institutet, Solna 17177, Sweden.
Vandré C FigueiredoDepartment of Biological Sciences, Oakland University, Rochester, MI 48309, USA.
Christopher S FryCenter for Muscle Biology, University of Kentucky, Lexington, KY 40536, USA.
John J McCarthyDepartment of Physiology, College of Medicine, University of Kentucky, Lexington, KY 40508, USA.
Yuan WenDepartment of Physiology, College of Medicine, University of Kentucky, Lexington, KY 40508, USA.
Kevin A MurachDepartment of Health, Human Performance, and Recreation, Exercise Science Research Center, University of Arkansas, Fayetteville, AR 72701, USA.
Ferdinand von WaldenDepartment of Women's and Children's Health, Karolinska Institutet, Solna 17177, Sweden.
University of Kentucky · USKarolinska Institutet · SEUniversity of Nebraska–Lincoln · USOakland University · USUniversity of Arkansas at Fayetteville · US

Funding

The role of stress in the fetal origin of obesity and metabolic dysfunctionP20GM104320 · NIGMS · UNIVERSITY OF NEBRASKA LINCOLN · PI ZEMPLENI, JANOS · 2014 to 2024
$24.9M
Mediators of Muscle Rejuvenation with AgingR01AG080047 · NIA · UNIVERSITY OF ARKANSAS AT FAYETTEVILLE · PI Kevin Murach · 2023 to 2026
$2.3M
Myonuclear Epigenetics of Skeletal Muscle Mass Regulation with AgeR00AG063994 · NIA · UNIVERSITY OF ARKANSAS AT FAYETTEVILLE · PI MURACH, KEVIN · 2021 to 2023
$735k
Contribution of ribosome specialization to the pathophysiology of muscular dystrophyK99AR081367 · NIAMS · UNIVERSITY OF KENTUCKY · PI WEN, YUAN · 2022 to 2023
$234k
NIAMS NIH HHS K99 AR081367NIA NIH HHS R00 AG063994NIA NIH HHS R01 AG080047NIGMS NIH HHS P20 GM104320
6 · The paper itself

Abstract

The central dogma of molecular biology dictates the general flow of molecular information from DNA that leads to a functional cellular outcome. In skeletal muscle fibers, the extent to which global myonuclear transcriptional alterations, accounting for epigenetic and post-transcriptional influences, contribute to an adaptive stress response is not clearly defined. In this investigation, we leveraged an integrated analysis of the myonucleus-specific DNA methylome and transcriptome, as well as myonuclear small RNA profiling to molecularly define the early phase of skeletal muscle fiber hypertrophy. The analysis of myonucleus-specific mature microRNA and other small RNA species provides new directions for exploring muscle adaptation and complemented the methylation and transcriptional information. Our integrated multi-omics interrogation revealed a coordinated myonuclear molecular landscape during muscle loading that coincides with an acute and rapid reduction of oxidative metabolism. This response may favor a biosynthesis-oriented metabolic program that supports rapid hypertrophic growth.

Indexed as

MicroRNAsMuscle, SkeletalAnimalsDNA MethylationFemaleHypertrophyMiceRNA, MessengerMicroRNAsRNA, Messengerepigeneticsmitochondrial respirationoxidative metabolismRNA sequencingRRBSsmall RNA sequencing

Identifiers

PMID38020067
PMCPMC10666992
OpenAlexW4388554471

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.