Evidence map›Paper›PMID 38020021›Full record

ArticleRSC advances2023

Integration of machine learning in 3D-QSAR CoMSIA models for the identification of lipid antioxidant peptides.

Thi Thanh Nha Tran, Thi Dieu Thuan Tran, Thi Thu Thuy Bui

Open access · goldAbstract read
In one paragraph

Article in RSC advances, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
1.8field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 9 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Thi Thanh Nha TranFaculty of Chemical Engineering, Industrial University of Ho Chi Minh City 12 Nguyen Van Bao Ho Chi Minh City 700000 Vietnam tranthithanhnha@iuh.edu.vn.ORCID https://orcid.org/0000-0003-4792-6540
Thi Dieu Thuan TranFaculty of Chemical Engineering, Industrial University of Ho Chi Minh City 12 Nguyen Van Bao Ho Chi Minh City 700000 Vietnam tranthithanhnha@iuh.edu.vn.ORCID https://orcid.org/0000-0002-5837-0800
Thi Thu Thuy BuiFaculty of Chemical Engineering, Industrial University of Ho Chi Minh City 12 Nguyen Van Bao Ho Chi Minh City 700000 Vietnam tranthithanhnha@iuh.edu.vn.
Industrial University of Ho Chi Minh City · VN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The comparative molecular similarity indices analysis (CoMSIA) method is a widely used 3D-quantitative structure-activity relationship (QSAR) approach in the field of medicinal chemistry and drug design. However, relying solely on the Partial Least Square algorithm to build models using numerous CoMSIA indices has, in some cases, led to statistically underperforming models. This issue has also affected 3D-CoMSIA models constructed for the ferric thiocyanate (FTC) dataset from linoleic antioxidant measurements. In this study, a novel modeling routine has been developed incorporating various machine learning (ML) techniques to explore different options for feature selection, model fitting, and tuning algorithms with the ultimate goal of arriving at optimal 3D-CoMSIA models with high predictivity for the FTC activity. Recursive Feature Selection and SelectFromModel techniques were applied for feature selection, resulting in a significant improvement in model fitting and predictivity (

Identifiers

PMID38020021
PMCPMC10654693
OpenAlexW4388777816

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.