Evidence map›Paper›PMID 38018859›Full record

ArticleMicrobiology spectrum2024

Transcriptome profiling of type VI secretion system core gene

Sivakumar Ramamoorthy, Michelle Pena, Palash Ghosh, Ying-Yu Liao, Mathews Paret, Jeffrey B Jones, Neha Potnis

Open access · goldAbstract read
In one paragraph

Article in Microbiology spectrum, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.6field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 4 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Sivakumar RamamoorthyDepartment of Entomology and Plant Pathology, Auburn University , Auburn, Alabama, USA.ORCID 0000-0002-8359-1701
Michelle PenaDepartment of Entomology and Plant Pathology, Auburn University , Auburn, Alabama, USA.
Palash GhoshDepartment of Entomology and Plant Pathology, Auburn University , Auburn, Alabama, USA.
Ying-Yu LiaoDepartment of Plant Pathology, University of Florida , Gainesville, Florida, USA.
Mathews ParetDepartment of Plant Pathology, University of Florida , Gainesville, Florida, USA.ORCID 0000-0002-2520-0418
Jeffrey B JonesDepartment of Plant Pathology, University of Florida , Gainesville, Florida, USA.ORCID 0000-0003-0061-470X
Neha PotnisDepartment of Entomology and Plant Pathology, Auburn University , Auburn, Alabama, USA.ORCID 0000-0002-5418-5894
Auburn University · USUniversity of Florida · US

Funding

National Science Foundation (NSF) IOS-1942956
6 · The paper itself

Abstract

importanceT6SS has received attention due to its significance in mediating interorganismal competition through contact-dependent release of effector molecules into prokaryotic and eukaryotic cells. Reverse-genetic studies have indicated the role of T6SS in virulence in a variety of plant pathogenic bacteria, including the one studied here,

Indexed as

Type VI Secretion SystemsXanthomonasBacterial ProteinsGene Expression ProfilingVirulenceBacterial ProteinsType VI Secretion Systemsbiofilmsplant-pathogen interactionssecretion systemT3SST6SStranscriptome sequencing

Identifiers

PMID38018859
PMCPMC10782981
OpenAlexW4389138752

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.