Evidence map›Paper›PMID 38017305›Full record

ArticleCurrent microbiology2023

Taxonomic and Predictive Functional Profile of Hydrocarbonoclastic Bacterial Consortia Developed at Three Different Temperatures.

Ningombam A Singha, Roselin Neihsial, Lhinglamkim Kipgen, Waniabha J Lyngdoh, Jopthiaw Nongdhar, Bobby Chettri, Prabhakar Singh, Arvind K Singh

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Article in Current microbiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.5field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 2 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Ningombam A SinghaDepartment of Biochemistry, North-Eastern Hill University, Shillong, 793022, India.
Roselin NeihsialDepartment of Biochemistry, North-Eastern Hill University, Shillong, 793022, India.
Lhinglamkim KipgenDepartment of Biochemistry, North-Eastern Hill University, Shillong, 793022, India.
Waniabha J LyngdohDepartment of Biochemistry, North-Eastern Hill University, Shillong, 793022, India.
Jopthiaw NongdharDepartment of Biochemistry, North-Eastern Hill University, Shillong, 793022, India.
Bobby ChettriDepartment of Biochemistry, North-Eastern Hill University, Shillong, 793022, India.
Prabhakar SinghDepartment of Biochemistry, North-Eastern Hill University, Shillong, 793022, India. prabhakar_31@yahoo.co.in.ORCID http://orcid.org/0000-0002-3794-8810
Arvind K SinghDepartment of Biochemistry, North-Eastern Hill University, Shillong, 793022, India.
North Eastern Hill University · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Microbial community exhibit shift in composition in response to temperature variation. We report crude oil-degrading activity and high-throughput 16S rRNA gene sequencing (metagenome) profiles of four bacterial consortia enriched at three different temperatures in crude oil-amended Bushnell-Hass Medium from an oily sludge sediment. The consortia were referred to as O (4 ± 2 ℃ in 3% w/v crude oil), A (25 ± 2 ℃ in 1% w/v crude oil), H (25 ± 2 ℃ in 3% w/v crude oil), and X (45 ± 2 ℃ in 3% w/v crude oil). The hydrocarbon-degrading activity was highest for consortium A and H and lowest for consortium O. The metagenome profile revealed the predominance of Proteobacteria (62.12-1.25%) in each consortium, followed by Bacteroidota (18.94-37.77%) in the consortium O, A, and H. Contrarily, consortium X comprised 7.38% Actinomycetota, which was essentially low (< 0.09%) in other consortia, and only 0.41% Bacteroidota. The PICRUSt-based functional analysis predicted major functions associated with the metabolism and 5060 common KEGG Orthology (KOs). A total of 296 KOs were predicted exclusively in consortium X. Additionally, 247 KOs were predicted from xenobiotic biodegradation pathways. This study found that temperature had a stronger influence on the composition and function of the bacterial community than crude oil concentration.

Indexed as

Microbial ConsortiaPetroleumBacteriaBacteroidetesBiodegradation, EnvironmentalHydrocarbonsRNA, Ribosomal, 16STemperatureHydrocarbonsPetroleumRNA, Ribosomal, 16S

Identifiers

PMID38017305
OpenAlexW4389074899

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.